Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 4.0e-127 458.4 277 100.0
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.0e-127 458.4 277 100.0
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.0e-119 431.8 287 81.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.6e-114 414.1 277 85.2
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.8e-111 406.4 290 80.3
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.6e-107 393.3 277 75.5
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.2e-76 289.3 286 58.0
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.9e-68 263.5 285 61.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 9.3e-60 234.6 264 54.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 7.9e-59 231.5 279 54.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 3.3e-57 226.1 280 53.2
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.3e-57 226.1 280 53.2
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.6e-51 207.2 272 46.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.6e-51 206.1 263 52.5
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.8e-50 203.8 266 45.5
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 5.1e-50 202.2 266 45.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.5e-49 200.7 280 45.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.0e-49 200.3 290 50.7
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.0e-49 200.3 267 45.3
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.7e-48 197.2 270 45.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 4.8e-48 195.7 267 44.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.1e-47 194.5 266 47.0
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.8e-47 193.7 273 50.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 5.3e-47 192.2 264 47.3
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 6.9e-47 191.8 254 44.1
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 3.4e-46 189.5 277 48.4
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.6e-43 180.6 272 41.9
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.7e-43 179.1 264 46.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.2e-42 175.6 273 43.6
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.6e-41 173.3 266 42.5
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 5.7e-41 172.2 272 43.0
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.7e-40 170.6 277 42.6
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 6.3e-40 168.7 260 42.7
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.1e-39 167.9 269 46.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 5.3e-39 165.6 294 41.8
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 5.3e-39 165.6 264 43.9
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.6e-38 163.3 264 41.7
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 5.9e-38 162.2 242 43.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.3e-37 161.0 247 43.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.9e-37 159.8 276 42.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 8.5e-37 158.3 278 39.9
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.1e-36 157.9 274 42.0
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.5e-36 157.5 273 40.7
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.6e-35 152.9 264 41.3
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.4e-34 151.0 261 42.9
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.4e-34 151.0 248 41.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.8e-34 150.6 249 44.2
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.5e-33 147.5 237 39.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-33 146.4 254 37.8
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.2e-32 143.7 152 50.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.2e-32 143.7 282 40.1
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.8e-32 143.3 252 41.3
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 6.3e-32 142.1 259 38.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.8e-31 140.6 142 54.2
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.4e-31 140.2 264 37.9
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 5.3e-31 139.0 257 40.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.3e-31 139.0 259 39.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.2e-30 137.9 278 39.6
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.6e-30 137.5 266 41.4
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.0e-30 137.1 258 42.6
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.5e-30 136.0 152 46.7
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.5e-30 136.0 250 40.4
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 5.9e-30 135.6 252 36.5
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.7e-30 135.2 258 42.2
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.0e-29 134.8 269 37.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.3e-29 134.4 269 37.2
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.7e-29 134.0 260 39.2
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.2e-29 133.7 275 37.5
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 6.5e-29 132.1 263 36.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 2.5e-28 130.2 252 39.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.5e-28 130.2 275 35.6
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.2e-28 129.8 254 44.9
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 5.5e-28 129.0 298 37.9
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.6e-27 127.5 281 35.2
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 5.2e-26 122.5 278 38.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.6e-25 120.2 250 36.4
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.4e-25 119.8 274 36.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 9.8e-25 118.2 252 36.5
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.7e-24 117.5 267 37.1
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 3.7e-24 116.3 265 38.5
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 6.3e-24 115.5 267 38.2
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 8.3e-24 115.2 322 31.7
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.1e-23 114.8 265 38.1
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.1e-23 113.2 139 48.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 4.1e-23 112.8 243 35.0
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.6e-22 110.9 264 35.6
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.5e-22 109.8 266 34.2
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 5.9e-22 109.0 266 34.2
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.7e-21 107.5 267 38.2
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.8e-21 106.3 263 36.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.8e-21 106.3 128 49.2
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 5.0e-21 105.9 265 34.7
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 6.5e-21 105.5 257 33.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.1e-20 104.8 267 34.5
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.9e-20 104.0 263 36.1
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.9e-20 104.0 123 49.6
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.9e-20 104.0 348 33.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 4.2e-20 102.8 128 55.5
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 7.2e-20 102.1 276 38.0
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-19 101.3 120 44.2
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.8e-19 100.1 259 38.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.7e-19 99.4 270 34.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.7e-19 99.4 246 37.8
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.1e-19 99.0 249 37.8
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.0e-18 96.7 269 32.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.6e-17 93.6 224 33.0
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 4.4e-17 92.8 306 32.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 4.4e-17 92.8 272 32.7
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 8.3e-16 88.6 268 36.6
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.1e-15 88.2 136 43.4
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.1e-15 86.3 139 37.4
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 5.4e-15 85.9 77 53.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.9e-14 82.4 261 32.6
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.9e-14 82.4 261 32.6
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 4.4e-09 66.2 156 33.3
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 7.0e-07 58.9 252 31.7
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 5.9e-06 55.8 63 50.8


User provided reference genes

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