Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 3.7e-238 827.8 411 100.0
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.8e-232 807.0 419 96.4
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 9.5e-210 733.4 418 88.8
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 5.4e-173 611.3 416 71.9
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 5.8e-159 564.7 419 70.2
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 3.3e-154 548.9 422 66.1
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.5e-151 540.0 414 66.4
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.6e-148 530.0 421 62.5
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 8.8e-147 524.2 412 64.3
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.0e-146 523.1 332 83.4
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 6.3e-145 518.1 421 64.1
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.4e-144 516.9 418 62.9
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 5.9e-143 511.5 411 63.0
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.7e-142 510.0 411 60.8
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 5.0e-142 508.4 421 59.9
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.1e-141 507.3 416 61.1
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 7.2e-141 504.6 425 60.0
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 9.4e-141 504.2 422 60.2
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.6e-140 503.4 416 60.6
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 1.6e-140 503.4 412 61.4
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.6e-140 503.4 418 62.2
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.7e-140 502.7 402 62.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.7e-140 502.7 538 53.3
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.8e-139 500.0 416 60.6
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.3e-139 499.6 439 57.4
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 2.0e-138 496.5 419 59.4
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.0e-138 496.5 414 59.9
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.6e-138 496.1 417 62.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 4.8e-137 491.9 410 59.3
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.2e-135 487.3 434 56.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 4.5e-135 485.3 410 58.3
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 5.0e-134 481.9 471 55.8
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 5.5e-133 478.4 420 58.3
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.6e-132 475.7 430 57.2
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 8.0e-132 474.6 419 56.1
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.4e-131 473.8 415 56.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.5e-130 470.3 422 57.3
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.0e-130 469.9 422 57.1
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 5.7e-130 468.4 416 54.8
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 7.4e-130 468.0 423 58.6
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 2.2e-129 466.5 397 59.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 3.7e-129 465.7 423 56.0
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 4.8e-129 465.3 428 57.7
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 6.3e-129 464.9 423 57.7
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 8.2e-129 464.5 416 54.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.1e-128 462.6 422 59.0
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.1e-128 462.6 446 55.2
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.1e-128 462.6 446 55.2
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 4.1e-128 462.2 418 58.1
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 7.0e-128 461.5 414 57.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 7.0e-128 461.5 427 57.4
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 1.2e-127 460.7 414 59.2
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 2.0e-127 459.9 428 57.5
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 3.5e-127 459.1 412 59.0
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 3.5e-127 459.1 414 56.0
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 3.5e-127 459.1 436 56.0
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 7.7e-127 458.0 425 55.5
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 4.7e-124 448.7 428 56.1
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 9.8e-122 441.0 429 51.5
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.3e-121 440.7 376 59.8
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 1.7e-121 440.3 369 61.2
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 2.2e-121 439.9 374 58.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.8e-121 439.5 452 52.4
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 6.3e-121 438.3 411 54.0
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.4e-120 437.2 415 53.7
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 1.8e-120 436.8 417 54.4
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 2.4e-120 436.4 413 54.2
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 2.7e-119 433.0 419 56.1
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.2e-118 429.9 409 52.1
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 3.8e-118 429.1 417 53.2
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 5.0e-118 428.7 409 52.1
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.5e-117 427.2 414 55.3
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 2.5e-117 426.4 412 51.9
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 4.7e-116 422.2 422 55.5
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 2.3e-115 419.9 325 62.8
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.0e-115 419.5 410 51.0
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.5e-114 417.2 417 49.6
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 2.6e-114 416.4 395 51.1
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.6e-111 407.1 416 50.7
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 6.6e-110 401.7 408 50.7
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 4.2e-109 399.1 379 53.3
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.2e-105 386.7 430 49.8
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 1.6e-103 380.6 333 56.8
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 5.6e-101 372.1 418 47.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.0e-99 367.9 440 46.4
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 4.0e-99 365.9 442 47.1
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 1.5e-98 364.0 344 52.9
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.5e-98 364.0 358 57.0
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.9e-96 357.1 325 54.5
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 1.7e-94 350.5 368 50.3
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.3e-91 340.1 418 45.0
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 7.3e-85 318.5 397 43.1
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.8e-83 313.9 430 41.9
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 6.4e-81 305.4 424 39.9
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.3e-77 292.7 347 45.0
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 4.7e-76 289.3 347 47.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.4e-75 287.7 288 48.3
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.8e-75 285.4 166 91.6
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.0e-66 257.3 272 50.7
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 7.6e-58 228.8 187 58.8
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.0e-54 218.4 190 53.2
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 9.6e-53 211.8 224 56.7
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 6.7e-46 189.1 400 29.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 4.5e-42 176.4 218 43.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.3e-41 174.9 230 43.0
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 6.9e-27 125.9 162 43.8
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 5.0e-25 119.8 86 62.8
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 3.5e-18 97.1 146 42.5
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 2.1e-15 87.8 242 28.5
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 6.1e-15 86.3 62 62.9
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 3.3e-13 80.5 99 54.5
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.2e-09 67.8 56 57.1
Prupe.1G388100 Prunus persica HOM05D000823 ORTHO05D000088 6.5e-09 66.2 51 64.7


User provided reference genes

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