Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g40053 Fragaria vesca HOM05D000651 ORTHO05D035305 1.7e-52 209.1 109 100.0
FvH4_7g18691 Fragaria vesca HOM05D000651 ORTHO05D001126 1.1e-43 179.9 107 86.9
FAN06G1796 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.1e-43 179.9 107 86.9
FAN10G0458 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.1e-43 179.9 107 86.9
FAN03G1696 Fragaria x ananassa HOM05D000651 ORTHO05D001126 2.4e-43 178.7 107 87.9
FAN01G1722 Fragaria x ananassa HOM05D000651 ORTHO05D001126 7.0e-43 177.2 107 86.0
FAN06G3799 Fragaria x ananassa HOM05D000651 ORTHO05D001126 9.1e-43 176.8 107 86.0
FAN10G1324 Fragaria x ananassa HOM05D000651 ORTHO05D001126 9.1e-43 176.8 107 86.0
FvH4_5g04771 Fragaria vesca HOM05D000651 ORTHO05D035305 2.6e-42 175.3 107 86.9
FAN14G1905 Fragaria x ananassa HOM05D000651 ORTHO05D035305 4.5e-42 174.5 102 89.2
RcHm_v2.0_Chr1g0362481 Rosa chinensis HOM05D000651 ORTHO05D001126 1.1e-40 169.9 107 85.0
Prupe.2G208200 Prunus persica HOM05D000651 ORTHO05D001126 2.0e-21 105.9 107 60.7
MD01G1102600 Malus domestica HOM05D000651 ORTHO05D001126 1.8e-19 99.4 105 61.9
MD07G1169500 Malus domestica HOM05D000651 ORTHO05D001126 1.2e-18 96.7 97 61.9
Eucgr.G02873 Eucalyptus grandis HOM05D000651 ORTHO05D001126 2.9e-17 92.0 103 53.4
Cfa001804 Carpinus fangiana HOM05D000651 ORTHO05D001126 1.6e-15 86.3 107 53.3
Haze_16744 Corylus avellana HOM05D000651 ORTHO05D001126 2.1e-15 85.9 107 53.3
QL08p054184 Quercus lobata HOM05D000651 ORTHO05D001126 1.4e-14 83.2 93 46.2
Cpa.g.sc53.140 Carica papaya HOM05D000651 ORTHO05D001126 3.0e-14 82.0 100 52.0
CANSAT56G1256 Cannabis sativa HOM05D000651 ORTHO05D001126 6.8e-14 80.9 107 45.8
Manes.10G050700 Manihot esculenta HOM05D000651 ORTHO05D001126 1.5e-13 79.7 103 50.5
Sed0014081 Sechium edule HOM05D000651 ORTHO05D001126 2.6e-13 79.0 107 50.5
Atru.chr12.857 Acer truncatum HOM05D000651 ORTHO05D001126 3.4e-13 78.6 105 50.5
COL.COLO4_36176 Corchorus olitorius HOM05D000651 ORTHO05D001126 5.8e-13 77.8 94 48.9
Manes.07G133132 Manihot esculenta HOM05D000651 ORTHO05D001126 7.5e-13 77.4 97 51.5
Sabra10G0175600 Salix brachista HOM05D000651 ORTHO05D001126 1.3e-12 76.6 109 42.2
Potri.010G227700 Populus trichocarpa HOM05D000651 ORTHO05D001126 2.2e-12 75.9 104 45.2
Thecc.10G085200 Theobroma cacao HOM05D000651 ORTHO05D001126 2.2e-12 75.9 96 45.8
ClCG08G007760 Citrullus lanatus HOM05D000651 ORTHO05D001126 3.7e-12 75.1 106 47.2
MELO3C019830.2 Cucumis melo HOM05D000651 ORTHO05D001126 3.7e-12 75.1 107 48.6
PGR142G2749 Punica granatum HOM05D000651 ORTHO05D001126 3.7e-12 75.1 99 41.4
TWI15G1057 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 3.7e-12 75.1 109 46.8
CsaV3_2G020870 Cucumis sativus L. HOM05D000651 ORTHO05D001126 4.9e-12 74.7 107 48.6
CsaV3_2G021150 Cucumis sativus L. HOM05D000651 ORTHO05D001126 4.9e-12 74.7 107 48.6
Peaxi162Scf00145g01112 Petunia axillaris HOM05D000651 ORTHO05D001126 4.9e-12 74.7 108 46.3
Potri.008G034800 Populus trichocarpa HOM05D000651 ORTHO05D001126 8.3e-12 73.9 104 47.1
THA.LOC104816426 Tarenaya hassleriana HOM05D000651 ORTHO05D001126 8.3e-12 73.9 104 40.4
Cc02_g10850 Coffea canephora HOM05D000651 ORTHO05D001126 1.1e-11 73.6 102 44.1
Lj2C21T6 Lonicera japonica HOM05D000651 ORTHO05D001126 1.1e-11 73.6 101 45.5
Duzib106G0396 Durio zibethinus HOM05D000651 ORTHO05D001126 2.4e-11 72.4 95 47.4
HanXRQChr05g0161301 Helianthus annuus HOM05D000651 ORTHO05D001126 3.2e-11 72.0 98 41.8
Hma1.2p1_0051F.1_g029320 Hydrangea macrophylla HOM05D000651 ORTHO05D001126 4.1e-11 71.6 102 44.1
Actinidia38872 Actinidia chinensis HOM05D000651 ORTHO05D001126 7.0e-11 70.9 107 43.9
Duzib114G0434 Durio zibethinus HOM05D000651 ORTHO05D001126 7.0e-11 70.9 95 46.3
Prupe.1G099300 Prunus persica HOM05D000651 ORTHO05D028847 7.0e-11 70.9 64 62.5
Lsat_1_v5_gn_9_70180 Lactuca sativa HOM05D000651 ORTHO05D001126 9.2e-11 70.5 89 44.9
TWI38G2104 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 9.2e-11 70.5 105 44.8
Duzib128G1575 Durio zibethinus HOM05D000651 ORTHO05D001126 1.2e-10 70.1 94 42.6
ECA232G3057 Erigeron canadensis HOM05D000651 ORTHO05D001126 1.2e-10 70.1 95 45.3
DCAR_006406 Daucus carota HOM05D000651 ORTHO05D001126 1.6e-10 69.7 73 46.6
Sabra08G0023200 Salix brachista HOM05D000651 ORTHO05D001126 1.6e-10 69.7 109 40.4
Lsat_1_v5_gn_2_113081 Lactuca sativa HOM05D000651 ORTHO05D001126 2.0e-10 69.3 96 42.7
PSO801G0506 Papaver somniferum HOM05D000651 ORTHO05D001126 2.7e-10 68.9 108 42.6
Ciclev10031297m.g Citrus clementina HOM05D000651 ORTHO05D001126 4.6e-10 68.2 108 44.4
PSO339G0356 Papaver somniferum HOM05D000651 ORTHO05D001126 4.6e-10 68.2 104 44.2
Dinv31239 Davidia involucrata HOM05D000651 ORTHO05D001126 6.0e-10 67.8 98 42.9
Gohir.A05G293600 Gossypium hirsutum HOM05D000651 ORTHO05D001126 6.0e-10 67.8 102 47.1
Lsat_1_v5_gn_9_70241 Lactuca sativa HOM05D000651 ORTHO05D001126 6.0e-10 67.8 105 41.0
Gorai.009G310800 Gossypium raimondii HOM05D000651 ORTHO05D001126 7.8e-10 67.4 100 44.0
HanXRQChr14g0455731 Helianthus annuus HOM05D000651 ORTHO05D001126 7.8e-10 67.4 80 47.5
BcaC01g04183 Brassica carinata HOM05D000651 ORTHO05D001126 1.0e-09 67.0 74 48.6
A03p36530 Brassica napus HOM05D000651 ORTHO05D001126 1.0e-09 67.0 75 49.3
Dinv34731 Davidia involucrata HOM05D000651 ORTHO05D001126 1.0e-09 67.0 96 44.8
Hma1.2p1_0145F.1_g065290 Hydrangea macrophylla HOM05D000651 ORTHO05D001126 1.0e-09 67.0 103 41.7
Hma1.2p1_0838F.1_g226280 Hydrangea macrophylla HOM05D000651 ORTHO05D001126 1.0e-09 67.0 75 46.7
Carub.0003s0960 Capsella rubella HOM05D000651 ORTHO05D001126 1.3e-09 66.6 67 52.2
Gohir.D05G294300 Gossypium hirsutum HOM05D000651 ORTHO05D001126 1.3e-09 66.6 100 44.0
arahy.Tifrunner.gnm1.ann1.7PSI4R Arachis hypogaea HOM05D000651 ORTHO05D001126 2.3e-09 65.9 104 41.3
BraA03t12820Z Brassica rapa HOM05D000651 ORTHO05D001126 2.3e-09 65.9 75 48.0
CSS0030125 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 2.3e-09 65.9 102 42.2
Oeu033871.1 Olea europaea HOM05D000651 ORTHO05D001126 2.3e-09 65.9 104 38.5
CSS0006467 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 3.0e-09 65.5 102 42.2
Sed0013730 Sechium edule HOM05D000651 ORTHO05D001126 3.0e-09 65.5 104 44.2
Cc01_g10440 Coffea canephora HOM05D000651 ORTHO05D001126 3.9e-09 65.1 104 42.3
Gohir.A05G411000 Gossypium hirsutum HOM05D000651 ORTHO05D001126 3.9e-09 65.1 85 45.9
C03p44130 Brassica napus HOM05D000651 ORTHO05D001126 5.0e-09 64.7 74 47.3
BolC3t16688H Brassica oleracea HOM05D000651 ORTHO05D001126 5.0e-09 64.7 74 47.3
CARHR084900 Cardamine hirsuta HOM05D000651 ORTHO05D001126 5.0e-09 64.7 99 41.4
Aa31LG3G3020 Aethionema arabicum HOM05D000651 ORTHO05D001126 8.6e-09 63.9 92 40.2
AL3G21770 Arabidopsis lyrata HOM05D000651 ORTHO05D001126 8.6e-09 63.9 68 51.5
HanXRQChr12g0376901 Helianthus annuus HOM05D000651 ORTHO05D001126 8.6e-09 63.9 97 41.2
PSO339G1454 Papaver somniferum HOM05D000651 ORTHO05D001126 8.6e-09 63.9 105 39.0
TWI15G0588 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 8.6e-09 63.9 103 40.8
Dinv36388 Davidia involucrata HOM05D000651 ORTHO05D001126 1.1e-08 63.5 73 45.2
Thhalv10020509m.g Eutrema salsugineum HOM05D000651 ORTHO05D001126 1.1e-08 63.5 98 41.8
AT3G10410 Arabidopsis thaliana HOM05D000651 ORTHO05D001126 1.5e-08 63.2 97 42.3
CSS0003298 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 1.5e-08 63.2 107 39.3
Lalb_Chr03g0036241 Lupinus albus HOM05D000651 ORTHO05D001126 1.5e-08 63.2 101 39.6
Oeu027952.2 Olea europaea HOM05D000651 ORTHO05D001126 1.5e-08 63.2 104 36.5
PSO063G6249 Papaver somniferum HOM05D000651 ORTHO05D001126 1.5e-08 63.2 105 41.0
BcaB04g21213 Brassica carinata HOM05D000651 ORTHO05D001126 1.9e-08 62.8 98 44.9
Lj2C1012T3 Lonicera japonica HOM05D000651 ORTHO05D001126 1.9e-08 62.8 99 40.4
ECA232G1050 Erigeron canadensis HOM05D000651 ORTHO05D001126 2.5e-08 62.4 80 42.5
SGA_v2.0_scaffold62G21380 Striga asiatica HOM05D000651 ORTHO05D001126 2.5e-08 62.4 97 41.2
Lalb_Chr02g0152051 Lupinus albus HOM05D000651 ORTHO05D001126 3.3e-08 62.0 98 35.7
Sp3g08690 Schrenkiella parvula HOM05D000651 ORTHO05D001126 3.3e-08 62.0 96 43.8
arahy.Tifrunner.gnm1.ann1.RHLQ3D Arachis hypogaea HOM05D000651 ORTHO05D001126 4.3e-08 61.6 104 40.4
BraA01t04257Z Brassica rapa HOM05D000651 ORTHO05D001126 5.6e-08 61.2 68 54.4
Cc01_g10430 Coffea canephora HOM05D000651 ORTHO05D001126 5.6e-08 61.2 106 40.6
Lj3g0020041 Lotus japonicus HOM05D000651 ORTHO05D001126 7.3e-08 60.8 103 37.9
Peaxi162Scf00372g01015 Petunia axillaris HOM05D000651 ORTHO05D001126 7.3e-08 60.8 101 36.6
Sc06g0002070 Simmondsia chinensis HOM05D000651 ORTHO05D001126 7.3e-08 60.8 105 41.9
TPR.G22705 Trifolium pratense HOM05D000651 ORTHO05D001126 7.3e-08 60.8 69 43.5
arahy.Tifrunner.gnm1.ann1.9M9DE9 Arachis hypogaea HOM05D000651 ORTHO05D001126 9.5e-08 60.5 102 39.2
AUR62014943 Chenopodium quinoa HOM05D000651 ORTHO05D001126 9.5e-08 60.5 73 42.5
BcaC09g48099 Brassica carinata HOM05D000651 ORTHO05D001126 1.2e-07 60.1 96 44.8
BolC1t05403H Brassica oleracea HOM05D000651 ORTHO05D001126 1.2e-07 60.1 96 44.8
AUR62029198 Chenopodium quinoa HOM05D000651 ORTHO05D001126 1.2e-07 60.1 73 42.5
TAR623G0089 Trochodendron aralioides HOM05D000651 ORTHO05D001126 1.6e-07 59.7 103 40.8
vmacro04832 Vaccinium macrocarpon HOM05D000651 ORTHO05D001126 1.6e-07 59.7 105 41.9
vmacro10249 Vaccinium macrocarpon HOM05D000651 ORTHO05D001126 1.6e-07 59.7 105 41.9
arahy.Tifrunner.gnm1.ann1.YAWL8X Arachis hypogaea HOM05D000651 ORTHO05D001126 2.1e-07 59.3 102 38.2
Dinv29365 Davidia involucrata HOM05D000651 ORTHO05D001126 2.1e-07 59.3 105 38.1
Nitab4.5_0001163g0100 Nicotiana tabacum HOM05D000651 ORTHO05D001126 2.1e-07 59.3 99 40.4
RcHm_v2.0_Chr1g0362451 Rosa chinensis HOM05D000651 ORTHO05D348905 2.1e-07 59.3 40 67.5
TAR633G2081 Trochodendron aralioides HOM05D000651 ORTHO05D001126 2.1e-07 59.3 104 40.4
Migut.F01951 Erythranthe guttata HOM05D000651 ORTHO05D001126 2.8e-07 58.9 103 39.8
Lj5g0009503 Lotus japonicus HOM05D000651 ORTHO05D001126 2.8e-07 58.9 71 46.5
Oeu013847.1 Olea europaea HOM05D000651 ORTHO05D001126 2.8e-07 58.9 105 40.0
Actinidia34802 Actinidia chinensis HOM05D000651 ORTHO05D001126 3.6e-07 58.5 102 41.2
Eucgr.J00381 Eucalyptus grandis HOM05D000651 ORTHO05D001126 3.6e-07 58.5 107 38.3
Gohir.D04G005000 Gossypium hirsutum HOM05D000651 ORTHO05D001126 3.6e-07 58.5 93 40.9
Gorai.012G006300 Gossypium raimondii HOM05D000651 ORTHO05D001126 3.6e-07 58.5 93 40.9
Lj5g0004289 Lotus japonicus HOM05D000651 ORTHO05D001126 3.6e-07 58.5 70 42.9
Nn2g13816 Nelumbo nucifera HOM05D000651 ORTHO05D001126 3.6e-07 58.5 103 36.9
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 4.7e-07 58.2 99 44.4
MD00G1032400 Malus domestica HOM05D000651 ORTHO05D001126 4.7e-07 58.2 107 39.3
Nitab4.5_0000567g0070 Nicotiana tabacum HOM05D000651 ORTHO05D001126 6.2e-07 57.8 101 36.6
PGSC0003DMG400013995 Solanum tuberosum HOM05D000651 ORTHO05D001126 6.2e-07 57.8 105 37.1
ATR0723G030 Amborella trichopoda HOM05D000651 ORTHO05D001126 8.0e-07 57.4 102 38.2
Peaxi162Scf00026g00245 Petunia axillaris HOM05D000651 ORTHO05D001126 8.0e-07 57.4 110 34.5
PGSC0003DMG400031068 Solanum tuberosum HOM05D000651 ORTHO05D001126 8.0e-07 57.4 107 38.3
SGA_v2.0_scaffold27G11554 Striga asiatica HOM05D000651 ORTHO05D001126 8.0e-07 57.4 107 34.6
Cpa.g.sc1.16 Carica papaya HOM05D000651 ORTHO05D001126 1.1e-06 57.0 73 41.1
Glyma.15G156200 Glycine max HOM05D000651 ORTHO05D001126 1.1e-06 57.0 68 44.1
Lsat_1_v5_gn_2_96681 Lactuca sativa HOM05D000651 ORTHO05D001126 1.1e-06 57.0 110 40.9
Lj3g0004933 Lotus japonicus HOM05D000651 ORTHO05D001126 1.1e-06 57.0 109 35.8
Phvul.011G084700 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 1.1e-06 57.0 70 45.7
BraA05t22666Z Brassica rapa HOM05D000651 ORTHO05D001126 1.4e-06 56.6 99 40.4
ECA238G4584 Erigeron canadensis HOM05D000651 ORTHO05D001126 1.4e-06 56.6 72 41.7
Nitab4.5_0002001g0010 Nicotiana tabacum HOM05D000651 ORTHO05D001126 1.4e-06 56.6 108 38.9
Psat6g092800 Pisum sativum HOM05D000651 ORTHO05D001126 1.4e-06 56.6 88 39.8
Aqoxy2G01731 Aquilegia oxysepala HOM05D000651 ORTHO05D001126 1.8e-06 56.2 105 34.3
CSS0002849 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 1.8e-06 56.2 99 39.4
Ciclev10028234m.g Citrus clementina HOM05D000651 ORTHO05D001126 1.8e-06 56.2 99 36.4
EL10Ac9g22595 Beta vulgaris HOM05D000651 ORTHO05D001126 2.3e-06 55.8 76 38.2
A05p38750 Brassica napus HOM05D000651 ORTHO05D001126 2.3e-06 55.8 99 40.4
AUR62040621 Chenopodium quinoa HOM05D000651 ORTHO05D001126 2.3e-06 55.8 95 34.7
Lj3g0009742 Lotus japonicus HOM05D000651 ORTHO05D001126 3.1e-06 55.5 102 36.3
Solyc11g008280.3 Solanum lycopersicum HOM05D000651 ORTHO05D001126 3.1e-06 55.5 103 35.0
Sopen06g007590 Solanum pennellii HOM05D000651 ORTHO05D001126 3.1e-06 55.5 105 35.2
Sopen11g004090 Solanum pennellii HOM05D000651 ORTHO05D001126 3.1e-06 55.5 103 35.0
Nitab4.5_0000329g0240 Nicotiana tabacum HOM05D000651 ORTHO05D001126 4.0e-06 55.1 75 38.7
COL.COLO4_11114 Corchorus olitorius HOM05D000651 ORTHO05D001126 6.8e-06 54.3 73 43.8
Peaxi162Scf00892g00114 Petunia axillaris HOM05D000651 ORTHO05D001126 6.8e-06 54.3 110 31.8
Ah.03g136850 Amaranthus hybridus HOM05D000651 ORTHO05D001126 8.9e-06 53.9 73 38.4
MSTRG.21093 Avicennia marina HOM05D000651 ORTHO05D001126 8.9e-06 53.9 98 37.8
DCAR_006411 Daucus carota HOM05D000651 ORTHO05D001126 8.9e-06 53.9 106 38.7
Eucgr.J00371 Eucalyptus grandis HOM05D000651 ORTHO05D001126 8.9e-06 53.9 63 44.4
Glyma.10G104300 Glycine max HOM05D000651 ORTHO05D001126 8.9e-06 53.9 70 42.9
Phvul.011G075351 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 8.9e-06 53.9 66 48.5
Phvul.011G085000 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 8.9e-06 53.9 66 48.5
Phvul.L001782 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 8.9e-06 53.9 66 48.5
SGA_v2.0_scaffold263G45961 Striga asiatica HOM05D000651 ORTHO05D001126 8.9e-06 53.9 73 39.7
TWI79G1053 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 8.9e-06 53.9 93 39.8


User provided reference genes

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