Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.3e-119 431.8 226 100.0
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 3.3e-111 405.2 230 92.6
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 2.1e-94 349.4 239 79.9
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 2.3e-88 329.3 237 76.4
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 4.3e-87 325.1 237 75.9
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.6e-87 324.7 226 80.1
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.1e-86 320.9 226 79.2
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.4e-69 266.2 222 64.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 5.8e-68 261.5 245 60.4
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 1.4e-66 256.9 226 62.4
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 2.4e-66 256.1 250 58.4
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 2.4e-66 256.1 222 62.6
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.6e-65 253.4 191 70.2
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 4.6e-65 251.9 234 62.4
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 4.6e-65 251.9 239 62.3
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.9e-65 251.1 238 59.7
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 1.3e-64 250.4 218 61.5
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.3e-64 249.6 229 61.1
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 3.0e-64 249.2 238 59.2
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 3.0e-64 249.2 237 56.1
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.1e-63 247.3 215 62.3
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 3.3e-63 245.7 217 62.2
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 4.3e-63 245.4 247 57.9
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 5.6e-63 245.0 215 59.5
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 5.6e-63 245.0 227 59.9
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 7.4e-63 244.6 230 61.3
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 9.6e-63 244.2 232 61.2
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 1.3e-62 243.8 229 59.0
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 4.8e-62 241.9 230 59.6
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 1.1e-61 240.7 245 58.8
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 2.4e-61 239.6 196 64.3
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 4.0e-61 238.8 228 60.1
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 5.8e-60 235.0 235 57.9
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 7.6e-60 234.6 221 57.5
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 1.3e-59 233.8 221 59.7
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.7e-59 233.4 230 57.0
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.2e-59 233.0 229 57.6
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.2e-59 233.0 215 61.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 2.2e-59 233.0 218 59.2
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 4.9e-59 231.9 236 56.8
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.2e-57 227.3 231 56.3
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 2.1e-57 226.5 220 58.6
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 2.7e-57 226.1 216 57.4
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.7e-57 226.1 208 61.1
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 4.6e-57 225.3 227 55.5
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 6.0e-57 224.9 233 55.8
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 1.3e-56 223.8 206 59.2
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 1.8e-56 223.4 193 62.7
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.8e-56 223.4 240 53.3
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 3.0e-56 222.6 226 53.5
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.9e-56 222.2 216 55.6
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 8.7e-56 221.1 191 61.3
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 8.7e-56 221.1 225 56.4
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.1e-55 220.7 190 61.6
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.5e-55 220.3 223 56.1
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 1.9e-55 219.9 221 56.6
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 2.5e-55 219.5 220 56.8
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 3.3e-55 219.2 221 56.6
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 4.3e-55 218.8 203 61.1
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 5.7e-55 218.4 221 56.6
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 7.4e-55 218.0 206 56.3
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 9.6e-55 217.6 227 55.5
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 2.8e-54 216.1 192 60.9
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.7e-54 215.7 202 59.9
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 4.8e-54 215.3 229 54.1
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.1e-53 214.2 220 55.9
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.4e-53 213.8 209 56.5
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 2.4e-53 213.0 228 52.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 4.1e-53 212.2 210 57.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 6.9e-53 211.5 238 50.8
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 1.5e-52 210.3 166 68.7
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.6e-52 209.5 213 56.3
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.6e-52 209.5 228 54.4
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 4.5e-52 208.8 182 58.8
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.3e-51 207.2 200 59.5
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.9e-51 206.1 230 54.8
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 8.4e-51 204.5 238 52.5
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 8.4e-51 204.5 231 53.2
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 2.1e-49 199.9 163 62.0
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 1.8e-48 196.8 164 62.8
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.8e-48 196.8 271 48.0
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 3.7e-46 189.1 192 54.7
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 6.3e-46 188.3 222 50.5
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.9e-43 179.5 194 52.6
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.9e-42 176.8 216 49.5
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 7.2e-42 174.9 220 49.1
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 9.4e-42 174.5 176 55.7
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.6e-41 173.7 212 45.8
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 1.7e-38 163.7 119 67.2
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.8e-38 162.9 198 51.0
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.3e-38 161.8 89 95.5
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.1e-37 161.0 188 51.1
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 4.5e-36 155.6 164 48.8
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.7e-33 146.4 195 44.6
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.1e-31 141.0 184 44.6
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 9.7e-31 137.9 168 44.0
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 2.8e-30 136.3 96 69.8
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 9.1e-29 131.3 94 73.4
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.0e-27 127.9 184 43.5
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.8e-27 125.9 131 52.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 6.5e-27 125.2 91 70.3
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.3e-19 100.9 109 51.4
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.7e-19 100.5 237 32.5
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 6.5e-19 98.6 109 47.7
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 6.5e-11 72.0 54 66.7
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.7e-06 57.4 62 53.2


User provided reference genes

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