Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 1.1e-66 257.3 220 100.0
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 5.2e-29 132.1 211 73.0
RcHm_v2.0_Chr6g0302111 Rosa chinensis HOM05D008022 ORTHO05D010147 4.7e-22 109.0 79 79.7
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 6.1e-22 108.6 235 68.9
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 8.3e-19 98.2 60 66.7
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 8.3e-19 98.2 49 79.6
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.4e-18 97.4 45 84.4
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 1.8e-18 97.1 59 66.1
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 1.8e-18 97.1 59 67.8
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 1.8e-18 97.1 55 69.1
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 9.2e-18 94.7 48 77.1
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 1.2e-17 94.4 49 73.5
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 1.2e-17 94.4 49 71.4
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 1.6e-17 94.0 48 72.9
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 1.6e-17 94.0 45 82.2
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.0e-17 93.6 49 73.5
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 2.0e-17 93.6 49 73.5
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 2.0e-17 93.6 49 73.5
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 2.7e-17 93.2 50 72.0
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 3.5e-17 92.8 60 66.7
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 3.5e-17 92.8 59 64.4
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 1.0e-16 91.3 58 63.8
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 1.3e-16 90.9 51 70.6
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 1.3e-16 90.9 47 72.3
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 2.3e-16 90.1 48 70.8
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 3.0e-16 89.7 47 74.5
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 3.0e-16 89.7 61 62.3
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 3.9e-16 89.4 60 60.0
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 5.0e-16 89.0 56 60.7
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 6.6e-16 88.6 48 70.8
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 6.6e-16 88.6 60 58.3
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 8.6e-16 88.2 47 70.2
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 1.1e-15 87.8 44 72.7
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 3.3e-15 86.3 59 57.6
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 4.3e-15 85.9 40 85.0
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 5.6e-15 85.5 49 65.3
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 2.8e-14 83.2 61 55.7
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 2.8e-14 83.2 47 66.0
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 2.8e-14 83.2 63 50.8
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.4e-13 80.9 57 61.4
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 2.3e-13 80.1 44 65.9
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 4.0e-13 79.3 48 60.4
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 4.0e-13 79.3 61 54.1
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 1.2e-12 77.8 49 61.2
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 3.4e-12 76.3 54 55.6
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 1.3e-11 74.3 45 62.2
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 4.9e-11 72.4 51 54.9
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 6.4e-11 72.0 58 48.3
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.1e-10 71.2 59 50.8
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 1.1e-10 71.2 54 51.9
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.4e-10 70.9 54 51.9
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.4e-10 70.9 40 65.0
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 1.4e-10 70.9 40 65.0
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 1.9e-10 70.5 45 53.3
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 2.4e-10 70.1 51 52.9
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 2.4e-10 70.1 51 52.9
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 2.4e-10 70.1 51 52.9
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 2.4e-10 70.1 51 52.9
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 3.2e-10 69.7 40 62.5
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 3.2e-10 69.7 40 65.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 7.0e-10 68.6 53 50.9
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 7.0e-10 68.6 53 50.9
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 7.0e-10 68.6 53 50.9
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 9.2e-10 68.2 54 50.0
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.2e-09 67.8 40 62.5
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 2.7e-09 66.6 40 60.0
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 6.0e-09 65.5 53 47.2
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 2.3e-08 63.5 42 54.8
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 3.9e-08 62.8 43 55.8
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 8.6e-08 61.6 42 57.1
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 1.1e-07 61.2 61 41.0
FAN15G2490 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.5e-07 60.8 34 88.2


User provided reference genes

Program Settings