Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.2e-76 288.5 163 100.0
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.7e-64 249.6 161 91.3
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.8e-64 248.8 150 95.3
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.9e-61 238.8 189 77.8
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.4e-55 219.9 154 83.8
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 5.3e-55 218.0 151 84.1
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 5.9e-54 214.5 154 85.7
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.7e-53 213.0 152 81.6
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.8e-53 211.8 150 81.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 6.5e-53 211.1 153 80.4
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 8.5e-53 210.7 153 79.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.1e-52 210.3 150 82.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.5e-52 209.9 152 80.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 3.2e-52 208.8 150 81.3
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.2e-52 208.4 150 80.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 5.5e-52 208.0 159 79.2
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 9.4e-52 207.2 151 80.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 9.4e-52 207.2 153 82.4
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 9.4e-52 207.2 150 80.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 9.4e-52 207.2 154 79.9
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.2e-51 206.8 159 78.6
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 2.1e-51 206.1 154 82.5
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 3.6e-51 205.3 153 83.0
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.0e-50 202.2 154 77.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.5e-49 199.9 151 80.1
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.0e-49 199.5 153 78.4
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 3.3e-49 198.7 151 80.1
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.3e-48 196.8 151 78.1
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 6.3e-48 194.5 150 76.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.8e-47 193.0 154 79.9
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.8e-47 193.0 150 78.7
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.4e-47 192.6 153 76.5
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 4.1e-47 191.8 153 77.8
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 7.0e-47 191.0 153 73.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 2.6e-46 189.1 150 78.0
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 7.7e-46 187.6 153 77.8
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.3e-45 186.8 152 77.0
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.7e-45 186.4 148 76.4
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 2.2e-45 186.0 152 73.7
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 2.2e-45 186.0 152 75.7
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 5.0e-45 184.9 155 76.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 3.2e-44 182.2 152 75.7
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 4.2e-44 181.8 150 73.3
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 5.5e-44 181.4 158 73.4
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 7.2e-44 181.0 155 74.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.2e-43 180.3 164 69.5
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.6e-43 179.9 150 74.7
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 3.6e-43 178.7 151 74.2
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 2.3e-42 176.0 153 71.2
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 3.0e-42 175.6 152 77.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 5.2e-42 174.9 150 74.0
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.5e-41 173.3 148 77.0
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.5e-41 173.3 153 70.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 2.0e-41 172.9 155 70.3
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 2.0e-41 172.9 147 75.5
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.4e-41 172.2 155 74.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 3.4e-41 172.2 150 70.7
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 7.5e-41 171.0 149 72.5
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.2e-40 169.5 148 73.0
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.2e-40 169.5 124 72.6
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 3.7e-40 168.7 148 74.3
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 6.3e-40 167.9 149 71.8
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 8.3e-40 167.5 144 75.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 1.1e-39 167.2 190 59.5
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.1e-39 167.2 150 70.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.4e-39 166.8 150 70.0
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 2.4e-39 166.0 152 69.7
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 9.1e-39 164.1 163 70.6
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.2e-38 163.7 151 70.2
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.6e-38 163.3 148 73.6
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.6e-38 163.3 153 70.6
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 2.0e-38 162.9 148 74.3
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 2.7e-38 162.5 147 73.5
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 4.5e-38 161.8 149 71.1
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 5.9e-38 161.4 158 68.4
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 5.9e-38 161.4 149 71.1
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 2.2e-37 159.5 149 73.8
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 2.9e-37 159.1 147 70.7
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 5.0e-37 158.3 157 68.2
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 5.0e-37 158.3 142 70.4
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 2.5e-36 156.0 186 47.8
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.2e-36 155.6 146 71.2
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.2e-36 155.6 186 51.1
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 9.4e-36 154.1 117 79.5
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 9.4e-36 154.1 111 81.1
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 4.7e-35 151.8 165 55.8
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 6.1e-35 151.4 146 69.2
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.3e-34 149.4 150 66.0
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.4e-33 145.2 111 78.4
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 2.2e-32 142.9 102 76.5
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.2e-32 142.9 153 64.7
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 8.3e-32 141.0 117 70.1
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.4e-31 140.2 152 53.9
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.5e-30 135.2 118 68.6
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 6.6e-29 131.3 109 64.2
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 8.6e-29 131.0 108 72.2
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.3e-28 129.0 123 58.5
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 9.5e-28 127.5 113 69.9
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 8.0e-27 124.4 142 54.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.0e-26 124.0 108 70.4
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 5.4e-23 111.7 118 61.0
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-22 110.2 55 92.7
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 3.3e-20 102.4 97 56.7
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 2.6e-17 92.8 106 51.9
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 7.0e-15 84.7 94 52.1
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 4.6e-14 82.0 141 43.3
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.0e-13 80.9 56 73.2
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 4.4e-09 65.5 96 40.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 3.7e-08 62.4 65 55.4


User provided reference genes

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