Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.9e-220 768.8 375 100.0
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 5.1e-202 707.6 373 90.9
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.2e-196 688.3 373 91.4
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 7.1e-196 687.2 373 90.9
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.2e-192 673.7 373 89.5
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.5e-169 599.7 375 76.5
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.3e-161 572.0 375 73.9
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.4e-159 565.8 375 72.5
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 5.9e-150 534.6 375 68.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 8.5e-149 530.8 375 68.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.8e-146 523.1 375 66.4
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 4.0e-146 521.9 374 67.6
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.5e-145 520.0 375 66.4
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.3e-144 516.9 373 66.2
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 2.8e-144 515.8 373 66.5
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 2.8e-144 515.8 376 66.5
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 8.3e-144 514.2 420 62.1
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 8.3e-144 514.2 370 66.2
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.8e-143 513.1 375 65.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.4e-143 512.7 374 65.5
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 5.4e-143 511.5 373 65.7
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 3.5e-142 508.8 374 65.2
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.5e-142 508.8 375 64.5
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 7.7e-142 507.7 374 65.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.3e-141 506.1 376 64.9
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.1e-140 503.8 370 65.7
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.5e-140 503.4 369 66.9
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.5e-140 503.4 374 64.2
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 4.2e-140 501.9 369 66.1
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 9.5e-140 500.7 373 64.3
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.6e-139 500.0 373 63.5
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.6e-139 500.0 373 63.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.1e-139 499.6 367 64.0
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 4.7e-139 498.4 373 63.8
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.0e-138 497.3 367 64.9
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.4e-137 491.9 373 64.9
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 9.8e-137 490.7 374 62.8
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.3e-136 490.3 377 64.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.3e-136 490.3 375 62.4
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 1.7e-136 490.0 374 63.9
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.2e-136 489.6 356 67.4
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 2.2e-136 489.6 374 65.5
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 6.3e-136 488.0 373 63.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 8.3e-136 487.6 375 62.1
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.1e-135 487.3 373 63.8
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.8e-135 486.5 373 63.8
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 2.4e-135 486.1 356 66.9
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 3.1e-135 485.7 375 64.3
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 7.0e-135 484.6 373 63.5
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.2e-134 483.8 375 61.6
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.6e-134 483.4 395 60.5
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.3e-133 479.6 373 61.9
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 2.9e-133 479.2 372 62.1
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 2.9e-133 479.2 374 60.7
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.9e-133 478.8 377 61.5
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.5e-132 476.1 372 61.8
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.2e-131 473.8 400 58.0
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.6e-131 473.4 373 62.5
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.6e-131 473.4 349 65.3
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 2.8e-131 472.6 372 60.5
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 2.8e-131 472.6 374 61.0
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 2.8e-131 472.6 384 59.9
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.7e-131 471.9 356 64.0
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.3e-130 469.5 373 61.4
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 4.0e-130 468.8 373 61.4
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.0e-130 468.8 378 60.8
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 6.8e-130 468.0 373 61.4
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.2e-129 467.2 376 60.9
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 9.2e-127 457.6 373 60.3
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 9.2e-127 457.6 370 59.2
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 2.7e-126 456.1 349 61.9
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.5e-126 455.7 356 59.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 3.5e-126 455.7 369 58.3
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 6.0e-126 454.9 374 59.6
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.3e-125 453.8 376 58.8
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.3e-125 453.0 374 60.2
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.3e-125 453.0 374 60.2
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.3e-124 448.7 378 56.6
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.2e-123 447.2 373 56.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.4e-122 443.7 366 57.7
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 7.1e-119 431.4 365 56.2
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.7e-117 426.8 277 74.0
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.7e-117 426.8 373 57.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 8.1e-115 417.9 374 54.8
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 8.9e-114 414.5 322 63.4
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.0e-113 413.3 377 56.2
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.7e-112 410.2 372 55.1
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.9e-111 406.8 304 64.5
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 3.2e-111 406.0 373 54.7
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 5.4e-111 405.2 327 59.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.3e-109 399.8 373 55.2
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.9e-108 396.7 303 63.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 5.6e-108 395.2 375 52.3
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 2.1e-107 393.3 369 52.0
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.1e-106 389.4 396 52.0
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 8.9e-106 387.9 368 51.1
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 6.4e-104 381.7 374 51.1
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 8.4e-104 381.3 255 72.5
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.2e-103 379.4 376 51.1
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 7.1e-103 378.3 356 54.2
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 8.1e-99 364.8 288 62.2
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.2e-97 360.9 372 51.9
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 3.3e-92 342.8 397 49.4
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 2.1e-91 340.1 276 60.9
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 9.0e-90 334.7 254 63.4
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.2e-88 330.1 284 57.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 4.9e-88 328.9 221 71.9
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 9.0e-82 308.1 338 49.1
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 2.2e-80 303.5 213 66.7
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 1.9e-79 300.4 374 43.6
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 6.0e-78 295.4 363 42.1
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 2.8e-75 286.6 374 40.1
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 7.6e-73 278.5 369 39.0
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 1.6e-67 260.8 396 37.6
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 4.5e-65 252.7 179 63.1
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 2.1e-54 217.2 193 54.9
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.7e-51 207.6 113 87.6
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 4.0e-45 186.4 164 54.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 5.5e-39 166.0 95 88.4
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 2.7e-38 163.7 148 55.4
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.4e-26 124.0 200 39.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 3.1e-26 123.6 115 50.4
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.7e-11 74.7 77 48.1
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 6.4e-11 72.8 44 70.5
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 4.1e-10 70.1 139 33.1


User provided reference genes

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