Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.1e-51 206.5 108 100.0
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 9.3e-48 193.4 108 96.3
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 6.3e-36 154.1 108 80.6
FAN27G0884 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.2e-33 145.6 84 92.9
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 2.9e-17 92.0 111 53.2
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.5e-16 89.0 111 49.5
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 4.2e-16 88.2 104 49.0
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 1.2e-15 86.7 85 57.6
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 1.6e-15 86.3 82 57.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.6e-15 86.3 82 58.5
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 2.1e-15 85.9 99 54.5
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 2.7e-15 85.5 108 52.8
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 3.6e-15 85.1 111 48.6
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 4.7e-15 84.7 111 48.6
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 8.0e-15 84.0 111 46.8
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 8.0e-15 84.0 92 54.3
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 8.0e-15 84.0 92 54.3
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.4e-14 83.2 98 53.1
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 1.8e-14 82.8 111 46.8
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 1.8e-14 82.8 110 49.1
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 1.8e-14 82.8 87 55.2
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 2.3e-14 82.4 111 45.9
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 3.9e-14 81.6 109 47.7
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 6.7e-14 80.9 104 48.1
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 1.1e-13 80.1 118 45.8
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 1.5e-13 79.7 110 50.9
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 1.5e-13 79.7 107 47.7
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 2.0e-13 79.3 115 52.2
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 3.3e-13 78.6 108 47.2
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 3.3e-13 78.6 87 56.3
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 4.4e-13 78.2 108 46.3
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 5.7e-13 77.8 108 48.1
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 5.7e-13 77.8 108 48.1
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.3e-12 76.6 85 48.2
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.7e-12 76.3 85 49.4
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.7e-12 76.3 84 53.6
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 1.7e-12 76.3 110 48.2
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 2.2e-12 75.9 109 51.4
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 2.2e-12 75.9 109 47.7
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 6.3e-12 74.3 125 44.0
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 8.2e-12 73.9 98 48.0
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 1.1e-11 73.6 110 48.2
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.1e-11 73.6 88 51.1
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 1.1e-11 73.6 101 48.5
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.8e-11 72.8 88 51.1
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 2.4e-11 72.4 108 43.5
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 2.4e-11 72.4 104 50.0
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 7.0e-11 70.9 110 42.7
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 7.0e-11 70.9 80 52.5
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.1e-11 70.5 82 47.6
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 9.1e-11 70.5 105 45.7
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 1.2e-10 70.1 106 48.1
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.6e-10 69.7 84 47.6
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.6e-10 69.7 119 47.1
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 2.0e-10 69.3 116 46.6
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 2.6e-10 68.9 104 47.1
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 3.5e-10 68.6 88 51.1
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 3.5e-10 68.6 112 42.0
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 5.9e-10 67.8 100 45.0
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.7e-09 66.2 89 43.8
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 2.9e-09 65.5 92 45.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 3.8e-09 65.1 99 49.5
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 8.5e-09 63.9 109 44.0
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 2.5e-08 62.4 108 44.4
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 3.2e-08 62.0 110 44.5
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 5.5e-08 61.2 102 42.2
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 3.0e-06 55.5 87 42.5
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 6.7e-06 54.3 108 40.7
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.7e-06 54.3 83 48.2
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 6.7e-06 54.3 83 48.2


User provided reference genes

Program Settings