Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.0e-74 282.3 140 100.0
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 4.1e-72 274.6 139 99.3
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.1e-72 274.6 139 99.3
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.6e-71 272.7 139 98.6
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.9e-71 270.8 139 97.8
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.0e-70 270.0 139 97.8
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 4.7e-60 234.6 139 85.6
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.4e-59 233.0 139 83.5
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 3.1e-59 231.9 139 82.7
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 8.9e-59 230.3 139 84.2
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.5e-58 229.6 139 82.7
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.6e-58 228.8 139 80.6
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 4.4e-58 228.0 139 82.7
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 5.8e-58 227.6 139 82.7
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.3e-57 226.5 139 82.7
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.7e-57 226.1 139 80.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.7e-57 226.1 139 81.3
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.7e-57 224.9 139 82.0
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.7e-57 224.9 139 82.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.9e-57 224.6 139 82.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 4.9e-57 224.6 139 79.1
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 6.4e-57 224.2 139 79.1
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 6.4e-57 224.2 139 82.0
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.4e-57 224.2 139 80.6
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.1e-56 223.4 139 82.0
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.9e-56 222.6 138 79.7
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 2.4e-56 222.2 139 77.7
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 3.2e-56 221.9 139 81.3
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 4.1e-56 221.5 139 78.4
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 4.1e-56 221.5 139 80.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.2e-56 220.3 139 78.4
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.2e-55 219.9 139 79.9
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.1e-55 219.2 139 77.7
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.7e-55 218.8 139 78.4
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.7e-55 218.8 139 77.7
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 2.7e-55 218.8 139 77.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.5e-55 218.4 139 77.7
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 3.5e-55 218.4 139 77.7
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.6e-55 218.0 139 77.7
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.0e-55 217.6 139 77.0
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 6.0e-55 217.6 139 77.0
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.0e-54 216.9 139 77.7
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.3e-54 216.5 139 78.4
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.3e-54 216.5 139 77.0
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.3e-54 216.5 139 77.0
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.7e-54 216.1 139 78.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.7e-54 216.1 139 76.3
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.7e-54 216.1 139 77.0
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.3e-54 215.7 139 77.0
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 3.0e-54 215.3 139 77.0
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 3.9e-54 214.9 139 77.7
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-54 214.5 139 76.3
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 5.1e-54 214.5 139 78.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 6.6e-54 214.2 139 79.9
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 6.6e-54 214.2 139 78.4
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.6e-54 213.8 139 76.3
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-53 213.4 139 75.5
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-53 213.4 139 75.5
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.5e-53 213.0 139 76.3
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.5e-53 213.0 139 76.3
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.9e-53 212.6 139 75.5
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.9e-53 212.6 139 77.0
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 5.6e-53 211.1 139 74.8
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 7.3e-53 210.7 139 77.0
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 2.1e-52 209.1 139 77.7
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.8e-52 208.8 139 74.8
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 3.6e-52 208.4 139 75.5
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 3.6e-52 208.4 139 75.5
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 3.6e-52 208.4 139 73.4
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 4.7e-52 208.0 139 74.1
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-51 206.8 139 77.0
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.1e-51 206.8 139 72.7
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.4e-51 206.5 139 72.7
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 2.3e-51 205.7 140 75.7
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 3.1e-51 205.3 138 77.5
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.8e-51 204.1 139 74.8
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-50 203.0 139 75.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.0e-50 202.6 139 71.9
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 3.4e-50 201.8 140 75.7
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.2e-49 199.1 122 82.0
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 8.4e-49 197.2 138 73.2
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.6e-47 193.0 138 76.1
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 3.5e-47 191.8 156 67.3
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 1.3e-46 189.9 139 69.8
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.5e-45 186.4 139 68.3
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 3.3e-45 185.3 139 66.9
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 9.6e-45 183.7 139 66.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.6e-44 183.0 140 67.1
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 3.6e-44 181.8 139 66.2
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 4.7e-44 181.4 139 66.2
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 4.7e-44 181.4 139 66.2
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 4.7e-44 181.4 139 66.2
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 6.2e-44 181.0 139 66.2
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 6.2e-44 181.0 139 66.9
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 2.4e-43 179.1 139 65.5
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 4.0e-43 178.3 139 65.5
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.5e-42 176.4 139 65.5
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 2.6e-42 175.6 139 65.5
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 4.4e-42 174.9 121 74.4
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 7.6e-42 174.1 141 66.0
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 3.8e-41 171.8 140 63.6
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 3.8e-41 171.8 140 63.6
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.9e-41 171.4 139 63.3
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.1e-40 170.2 140 63.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 2.4e-40 169.1 140 62.9
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 2.4e-40 169.1 140 62.9
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 5.4e-40 167.9 141 61.7
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.5e-37 159.1 139 58.3
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 1.8e-35 152.9 120 70.8
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.5e-34 149.8 92 79.3
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 7.1e-32 141.0 104 70.2
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 6.0e-23 111.3 80 67.5
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 4.5e-18 95.1 78 69.2
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 2.5e-16 89.4 77 63.6
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.1e-15 86.3 84 58.3
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 6.0e-15 84.7 139 35.3
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 6.3e-12 74.7 46 76.1
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 4.2e-08 62.0 158 29.7
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 4.6e-07 58.5 152 29.6
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 1.8e-06 56.6 47 59.6


User provided reference genes

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