Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.2e-170 603.2 323 100.0
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.8e-169 598.2 323 99.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.9e-169 597.8 323 99.1
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.9e-157 559.3 323 91.6
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 2.6e-138 495.7 325 83.1
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.3e-126 456.8 325 77.5
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.4e-125 451.1 330 75.5
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 4.1e-123 445.3 330 74.8
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 6.9e-123 444.5 330 74.8
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 9.1e-123 444.1 328 75.3
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.5e-122 441.8 326 73.9
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 8.5e-121 437.6 325 73.5
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.2e-120 435.3 325 72.0
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 4.2e-120 435.3 324 73.1
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 9.4e-120 434.1 326 73.0
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.6e-119 433.3 325 73.8
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 2.0e-117 426.4 293 77.5
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.6e-117 426.0 329 70.5
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 9.7e-117 424.1 332 70.2
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.3e-116 423.7 327 70.9
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.3e-116 423.7 250 91.2
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.7e-116 423.3 347 68.6
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 4.8e-116 421.8 326 71.8
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 8.2e-116 421.0 330 71.8
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.2e-114 417.2 331 70.1
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.2e-114 417.2 328 71.3
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 3.4e-114 415.6 319 73.0
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.9e-114 414.8 332 69.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 5.9e-114 414.8 321 72.3
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.7e-113 413.3 323 71.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 5.0e-113 411.8 325 70.2
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 8.5e-113 411.0 322 70.5
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 8.5e-113 411.0 331 68.9
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.4e-112 410.2 335 68.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.5e-112 409.5 318 71.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 5.5e-112 408.3 351 66.1
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 7.2e-112 407.9 312 71.5
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.1e-111 406.4 260 80.4
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 2.7e-111 406.0 333 68.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 2.7e-111 406.0 327 68.2
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 3.6e-111 405.6 335 67.2
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.6e-111 405.6 254 81.5
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 4.7e-111 405.2 323 69.3
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 6.1e-111 404.8 331 69.2
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.8e-110 403.3 330 69.7
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.0e-110 402.5 329 69.3
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 3.9e-110 402.1 293 76.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.2e-110 401.7 320 69.7
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 8.8e-110 401.0 249 81.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.6e-109 399.4 326 69.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 4.4e-109 398.7 321 68.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.3e-108 397.1 319 69.9
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.7e-108 396.7 320 67.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 1.7e-108 396.7 328 66.5
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.2e-108 396.4 250 82.0
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.2e-108 396.4 327 70.3
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.8e-108 396.0 327 69.4
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.8e-108 396.0 256 79.7
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.7e-108 395.6 259 79.5
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.4e-107 393.7 275 75.6
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.8e-107 393.3 325 68.3
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.8e-107 393.3 324 68.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 4.1e-107 392.1 329 66.3
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 9.1e-107 391.0 321 68.8
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 9.1e-107 391.0 325 67.4
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.6e-106 390.2 259 78.4
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.6e-106 390.2 327 66.7
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.5e-106 389.0 294 71.4
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 5.9e-106 388.3 290 72.8
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 7.7e-106 387.9 322 65.8
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.0e-105 387.5 329 66.6
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.2e-105 386.3 367 61.3
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 5.0e-105 385.2 324 68.2
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 8.5e-105 384.4 285 72.3
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 1.5e-104 383.6 323 66.3
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 4.2e-104 382.1 332 66.9
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 9.4e-104 380.9 295 71.2
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.7e-103 379.4 327 66.4
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.6e-103 379.0 236 82.2
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 4.0e-102 375.6 326 67.2
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 8.8e-102 374.4 298 67.8
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.5e-101 373.6 320 64.4
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.6e-101 372.9 238 79.4
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 9.7e-101 370.9 328 64.0
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.2e-100 369.8 359 60.7
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.8e-100 368.6 343 64.4
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 7.7e-98 361.3 295 66.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 5.0e-97 358.6 317 63.7
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.4e-91 340.5 324 60.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 9.1e-91 337.8 258 72.1
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 9.1e-91 337.8 221 74.2
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.9e-88 330.1 235 70.6
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.1e-87 326.6 264 68.2
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.8e-86 323.6 327 60.6
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.4e-83 313.9 221 76.9
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 4.3e-80 302.4 216 66.7
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.7e-79 298.9 261 65.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.7e-79 298.9 265 63.0
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 5.4e-75 285.4 239 66.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.0e-74 283.5 213 72.3
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 5.6e-72 275.4 327 48.6
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 7.5e-69 265.0 253 52.2
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.2e-66 257.7 260 50.8
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.6e-64 248.8 251 51.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.1e-62 244.6 265 49.8
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.0e-58 228.8 259 46.3
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.0e-58 228.8 257 49.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-54 218.0 129 86.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.1e-54 218.0 253 45.5
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.1e-50 203.8 265 42.3
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.9e-44 183.3 246 44.3
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-43 181.4 165 65.5
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.9e-40 170.6 123 72.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 3.3e-40 169.9 246 37.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.7e-25 119.0 244 29.9
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.5e-24 117.1 321 35.8
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 2.0e-21 107.5 254 31.1
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 4.1e-06 56.6 32 87.5
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 4.1e-06 56.6 52 57.7


User provided reference genes

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