Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 1.1e-295 1019.2 504 100.0
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.4e-233 811.6 589 75.0
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.5e-225 786.2 555 75.5
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.5e-217 759.6 549 74.0
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.1e-210 735.3 569 72.4
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.1e-196 690.3 522 73.4
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 5.8e-193 677.9 544 68.6
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 1.0e-160 570.9 376 82.2
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.8e-120 436.0 344 70.1
FAN05G0144 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.3e-75 288.1 234 68.4
FvH4_5g28462 Fragaria vesca HOM05D011367 ORTHO05D001590 1.6e-62 244.6 131 96.9
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.1e-53 213.8 159 70.4
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 2.6e-28 131.0 370 27.3
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 6.5e-27 126.3 271 28.0
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.5e-27 125.9 381 26.5
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-26 124.8 383 26.4
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.5e-26 124.4 381 26.5
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.5e-26 123.2 259 28.6
FAN05G1425 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.7e-25 120.2 71 88.7
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.3e-24 117.9 375 26.7
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 3.0e-24 117.5 446 25.6
RcHm_v2.0_Chr5g0050991 Rosa chinensis HOM05D011367 ORTHO05D001590 9.7e-23 112.5 224 37.5
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 8.2e-22 109.4 378 25.1
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 6.5e-19 99.8 226 28.8
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 1.6e-17 95.1 246 26.4
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 1.6e-17 95.1 221 29.4
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 2.7e-17 94.4 614 21.2
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 1.0e-16 92.4 257 26.8
FAN19G1587 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.2e-16 90.1 209 25.4
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 2.0e-15 88.2 549 21.7
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 4.4e-15 87.0 410 23.7
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.5e-15 86.3 281 25.3
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.8e-15 85.9 255 24.3
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.2e-14 84.7 208 27.9
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 2.8e-14 84.3 241 27.0
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-14 84.0 283 23.7
FAN04G0896 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.3e-14 82.8 272 23.9
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-13 81.6 240 23.3
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-13 81.6 240 23.3
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.2e-12 79.0 229 25.3
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-12 78.6 267 23.6
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.6e-12 78.6 543 21.5
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.5e-12 77.4 246 25.2
RcHm_v2.0_Chr1g0318221 Rosa chinensis HOM05D001313 ORTHO05D001590 7.7e-12 76.3 255 24.3
FAN07G1365 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.0e-11 75.9 292 23.3
RcHm_v2.0_Chr5g0033751 Rosa chinensis HOM05D011367 ORTHO05D050732 1.0e-11 75.9 57 61.4
FAN22G1831 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-11 75.5 292 23.3
FAN05G5162 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.3e-11 74.7 292 22.3
FvH4_7g08490 Fragaria vesca HOM05D001313 ORTHO05D001590 2.9e-11 74.3 237 22.4
FAN02G0597 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.9e-11 74.3 292 23.3
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 2.9e-11 74.3 276 24.3
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 6.6e-11 73.2 362 21.5
FAN16G2686 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.6e-11 72.8 388 21.1
FAN18G2573 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.6e-11 72.8 389 22.4
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.6e-11 72.8 243 21.4
FAN04G0296 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.4 292 22.6
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-10 72.4 323 22.0
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 1.1e-10 72.4 284 23.6
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.5e-10 72.0 292 22.9
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.9e-10 71.6 217 25.3
FAN12G3449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 71.6 292 21.9
FAN21G2565 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.5e-10 71.2 379 20.3
FAN19G0965 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.3e-10 70.9 292 22.6
FAN08G0758 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.2e-10 70.5 370 20.0
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.2e-10 70.5 391 21.2
RcHm_v2.0_Chr5g0012151 Rosa chinensis HOM05D011367 ORTHO05D050732 4.2e-10 70.5 57 57.9
RcHm_v2.0_Chr5g0041501 Rosa chinensis HOM05D001313 ORTHO05D001590 4.2e-10 70.5 299 22.4
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.2e-10 70.5 287 24.7
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.2e-10 70.5 251 21.5
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 7.2e-10 69.7 162 27.2
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.2e-10 69.7 401 23.4
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-09 68.9 287 24.7
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.6e-09 68.6 162 26.5
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-09 68.6 310 23.5
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.6e-09 68.6 217 21.7
FAN19G2309 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-09 68.2 364 20.6
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-09 67.8 306 23.5
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-09 67.8 401 23.2
FvH4_5g24283 Fragaria vesca HOM05D001313 ORTHO05D001590 4.7e-09 67.0 257 21.4
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-09 67.0 310 23.5
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-09 67.0 310 23.5
FAN27G0336 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.1e-09 66.6 40 70.0
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.8e-08 65.1 112 29.5
RcHm_v2.0_Chr4g0421591 Rosa chinensis HOM05D001313 ORTHO05D001590 1.8e-08 65.1 402 18.9
RcHm_v2.0_Chr3g0460221 Rosa chinensis HOM05D001313 ORTHO05D001590 2.3e-08 64.7 257 23.3
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.0e-08 64.3 252 23.0
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.2e-08 63.5 259 22.8
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.8e-08 63.2 114 30.7
FAN13G2634 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.9e-08 62.8 389 20.6
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 1.2e-07 62.4 229 23.1
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 1.5e-07 62.0 353 21.5
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-07 61.2 250 20.8
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.4e-07 60.5 96 33.3
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.7e-07 60.1 160 25.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.7e-07 60.1 250 20.8
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.5e-07 59.7 288 23.6
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-06 58.9 228 24.6
FAN04G2957 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-06 58.5 143 23.8
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-06 58.5 237 21.9
Lj5A81T87 Lonicera japonica HOM05D053520 ORTHO05D001590 3.7e-06 57.4 83 36.1
FAN09G0479 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.9e-06 57.0 305 21.3
FAN13G0579 Fragaria x ananassa HOM05D001313 ORTHO05D008319 4.9e-06 57.0 305 21.3
FAN20G1515 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.9e-06 57.0 305 21.3
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.9e-06 57.0 237 22.8
FvH4_2g15701 Fragaria vesca HOM05D001313 ORTHO05D008319 6.3e-06 56.6 229 22.7
FAN06G0107 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.3e-06 56.6 305 21.3
FAN16G1497 Fragaria x ananassa HOM05D001313 ORTHO05D001590 6.3e-06 56.6 305 21.3
FAN18G2179 Fragaria x ananassa HOM05D001313 ORTHO05D013602 6.3e-06 56.6 305 21.3
RcHm_v2.0_Chr0c19g0500051 Rosa chinensis HOM05D001313 ORTHO05D001590 6.3e-06 56.6 187 23.0
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 6.3e-06 56.6 163 24.5


User provided reference genes

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