Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g35170 Fragaria vesca HOM05D026264 ORTHO05D029669 3.6e-68 261.5 138 100.0
FAN15G3731 Fragaria x ananassa HOM05D026264 ORTHO05D029669 1.6e-60 236.1 138 92.8
RcHm_v2.0_Chr6g0306771 Rosa chinensis HOM05D026264 ORTHO05D029669 2.4e-48 195.7 136 76.5
FAN27G2277 Fragaria x ananassa HOM05D000805 ORTHO05D000624 3.1e-40 168.7 129 76.7
FAN20G1852 Fragaria x ananassa HOM05D026264 ORTHO05D029669 7.7e-39 164.1 138 67.4
CiPaw.07G201600 Carya illinoinensis HOM05D000805 ORTHO05D000624 8.1e-12 74.3 91 50.5
PSO063G5652 Papaver somniferum HOM05D000805 ORTHO05D000624 8.1e-12 74.3 80 53.8
PSO832G3184 Papaver somniferum HOM05D000805 ORTHO05D000624 8.1e-12 74.3 80 53.8
FAN20G2238 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.1e-11 73.9 99 49.5
Thecc.09G049000 Theobroma cacao HOM05D000805 ORTHO05D000624 1.1e-11 73.9 97 51.5
Cfa013392 Carpinus fangiana HOM05D000805 ORTHO05D000624 1.4e-11 73.6 85 54.1
FvH4_2g35151 Fragaria vesca HOM05D000805 ORTHO05D000624 2.3e-11 72.8 96 51.0
FAN20G2644 Fragaria x ananassa HOM05D000805 ORTHO05D000624 2.3e-11 72.8 96 51.0
Gohir.D06G089800 Gossypium hirsutum HOM05D000805 ORTHO05D000624 2.3e-11 72.8 79 51.9
Gorai.010G103700 Gossypium raimondii HOM05D000805 ORTHO05D000624 2.3e-11 72.8 79 51.9
Haze_21934 Corylus avellana HOM05D000805 ORTHO05D000624 3.1e-11 72.4 85 52.9
Gohir.A06G090900 Gossypium hirsutum HOM05D000805 ORTHO05D000624 3.1e-11 72.4 79 51.9
FvH4_2g35160 Fragaria vesca HOM05D000805 ORTHO05D000624 4.0e-11 72.0 82 52.4
TAR626G0937 Trochodendron aralioides HOM05D000805 ORTHO05D000624 4.0e-11 72.0 103 43.7
TAR626G1162 Trochodendron aralioides HOM05D000805 ORTHO05D000624 4.0e-11 72.0 103 43.7
COL.COLO4_21008 Corchorus olitorius HOM05D000805 ORTHO05D000624 5.2e-11 71.6 105 45.7
Prupe.1G443700 Prunus persica HOM05D000805 ORTHO05D000624 8.9e-11 70.9 78 53.8
EL10Ac2g03961 Beta vulgaris HOM05D000805 ORTHO05D000624 1.2e-10 70.5 80 51.2
Glyma.04G077600 Glycine max HOM05D000805 ORTHO05D000624 1.2e-10 70.5 88 47.7
Glyma.06G078700 Glycine max HOM05D000805 ORTHO05D000624 1.2e-10 70.5 88 47.7
MBI04_g06987_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 1.2e-10 70.5 94 46.8
Lalb_Chr23g0269771 Lupinus albus HOM05D000805 ORTHO05D000624 1.5e-10 70.1 90 45.6
Ciclev10009815m.g Citrus clementina HOM05D000805 ORTHO05D000624 2.0e-10 69.7 85 50.6
FvH4_3g15571 Fragaria vesca HOM05D000805 ORTHO05D000624 2.0e-10 69.7 114 46.5
RcHm_v2.0_Chr6g0306781 Rosa chinensis HOM05D000805 ORTHO05D000624 2.0e-10 69.7 99 49.5
Dinv23401 Davidia involucrata HOM05D000805 ORTHO05D000624 2.6e-10 69.3 103 43.7
AUR62040213 Chenopodium quinoa HOM05D000805 ORTHO05D000624 3.4e-10 68.9 80 51.2
Nn8g39009 Nelumbo nucifera HOM05D000805 ORTHO05D000624 3.4e-10 68.9 80 52.5
Gohir.A07G022188 Gossypium hirsutum HOM05D000805 ORTHO05D000624 4.4e-10 68.6 81 51.9
Sc06g0000870 Simmondsia chinensis HOM05D000805 ORTHO05D000624 4.4e-10 68.6 101 44.6
Gohir.D05G046400 Gossypium hirsutum HOM05D000805 ORTHO05D000624 5.8e-10 68.2 85 48.2
TPR.G12313 Trifolium pratense HOM05D000805 ORTHO05D000624 5.8e-10 68.2 92 46.7
Duzib187G0010 Durio zibethinus HOM05D000805 ORTHO05D000624 9.8e-10 67.4 79 51.9
Potri.006G234900 Populus trichocarpa HOM05D000805 ORTHO05D000624 1.3e-09 67.0 90 46.7
DCAR_003073 Daucus carota HOM05D000805 ORTHO05D000624 1.7e-09 66.6 79 53.2
Rhsim11G0049200 Rhododendron simsii HOM05D000805 ORTHO05D000624 1.7e-09 66.6 85 47.1
RcHm_v2.0_Chr6g0306791 Rosa chinensis HOM05D000805 ORTHO05D000624 1.7e-09 66.6 96 46.9
Gorai.009G047800 Gossypium raimondii HOM05D000805 ORTHO05D000624 2.2e-09 66.2 85 48.2
BcaB06g29636 Brassica carinata HOM05D000805 ORTHO05D000624 2.9e-09 65.9 107 40.2
BolC4t27103H Brassica oleracea HOM05D000805 ORTHO05D000624 2.9e-09 65.9 107 40.2
Ca_15641_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 2.9e-09 65.9 78 50.0
Lj1g0002121 Lotus japonicus HOM05D000805 ORTHO05D000624 2.9e-09 65.9 80 47.5
MD08G1109100 Malus domestica HOM05D000805 ORTHO05D000624 2.9e-09 65.9 92 46.7
Aqoxy7G01357 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 3.7e-09 65.5 80 47.5
CSS0007173 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 3.7e-09 65.5 96 42.7
Medtr3g109190 Medicago truncatula HOM05D000805 ORTHO05D000624 3.7e-09 65.5 78 48.7
Lalb_Chr08g0242891 Lupinus albus HOM05D000805 ORTHO05D000624 4.9e-09 65.1 103 42.7
TAR383G0309 Trochodendron aralioides HOM05D000805 ORTHO05D000624 4.9e-09 65.1 104 39.4
Aa31LG5G9790 Aethionema arabicum HOM05D000805 ORTHO05D000624 6.4e-09 64.7 80 47.5
Eucgr.C00618 Eucalyptus grandis HOM05D000805 ORTHO05D000624 6.4e-09 64.7 80 51.2
Manes.16G076500 Manihot esculenta HOM05D000805 ORTHO05D000624 8.3e-09 64.3 80 51.2
THA.LOC104818593 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 1.1e-08 63.9 80 46.2
A04p20090 Brassica napus HOM05D000805 ORTHO05D000624 1.4e-08 63.5 103 39.8
BraA04t17591Z Brassica rapa HOM05D000805 ORTHO05D000624 1.4e-08 63.5 103 39.8
Lj8P565T8 Lonicera japonica HOM05D000805 ORTHO05D000624 1.4e-08 63.5 80 47.5
Oeu038822.1 Olea europaea HOM05D000805 ORTHO05D000624 1.4e-08 63.5 74 51.4
ATR0705G219 Amborella trichopoda HOM05D000805 ORTHO05D000624 1.9e-08 63.2 80 45.0
arahy.Tifrunner.gnm1.ann1.YSQ5WX Arachis hypogaea HOM05D000805 ORTHO05D000624 2.4e-08 62.8 80 46.2
CSS0028786 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 2.4e-08 62.8 67 49.3
Lalb_Chr11g0064601 Lupinus albus HOM05D000805 ORTHO05D000624 5.4e-08 61.6 98 40.8
TWI63G0923 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 5.4e-08 61.6 97 44.3
arahy.Tifrunner.gnm1.ann1.N1YYK3 Arachis hypogaea HOM05D000805 ORTHO05D000624 7.1e-08 61.2 80 45.0
PSO782G4143 Papaver somniferum HOM05D000805 ORTHO05D000624 7.1e-08 61.2 96 38.5
Phvul.009G103600 Phaseolus vulgaris HOM05D000805 ORTHO05D000624 7.1e-08 61.2 86 41.9
Sabra06G0183300 Salix brachista HOM05D000805 ORTHO05D000624 7.1e-08 61.2 91 41.8
PSO063G0492 Papaver somniferum HOM05D000805 ORTHO05D000624 9.2e-08 60.8 96 38.5
Carub.0004s0571 Capsella rubella HOM05D000805 ORTHO05D000624 1.2e-07 60.5 98 41.8
Gohir.D07G024050 Gossypium hirsutum HOM05D000805 ORTHO05D000624 1.2e-07 60.5 81 45.7
Gorai.001G024800 Gossypium raimondii HOM05D000805 ORTHO05D000624 1.2e-07 60.5 81 45.7
Potri.018G057800 Populus trichocarpa HOM05D000805 ORTHO05D000624 2.1e-07 59.7 93 43.0
AT2G25890 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 2.7e-07 59.3 98 40.8
Cc00_g09240 Coffea canephora HOM05D000805 ORTHO05D000624 3.5e-07 58.9 79 45.6
ECA233G2751 Erigeron canadensis HOM05D000805 ORTHO05D000624 4.6e-07 58.5 78 46.2
Cpa.g.sc1868.2 Carica papaya HOM05D000805 ORTHO05D000624 6.0e-07 58.2 80 43.8
Migut.F00529 Erythranthe guttata HOM05D000805 ORTHO05D000624 6.0e-07 58.2 80 42.5
VMungo1309G1519 Vigna mungo HOM05D000805 ORTHO05D000624 6.0e-07 58.2 87 41.4
CDE09G0809 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 1.0e-06 57.4 80 43.8
CDE02G3253 Ceratophyllum demersum HOM05D000805 ORTHO05D000624 1.3e-06 57.0 80 41.2
TWI14G1264 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 1.3e-06 57.0 104 42.3
DCAR_018075 Daucus carota HOM05D000805 ORTHO05D000624 2.3e-06 56.2 70 48.6
Lsat_1_v5_gn_8_9800 Lactuca sativa HOM05D000805 ORTHO05D000624 3.0e-06 55.8 78 43.6
Lj1P975T23 Lonicera japonica HOM05D000805 ORTHO05D000624 3.0e-06 55.8 95 37.9
SGA_v2.0_scaffold56G19908 Striga asiatica HOM05D000805 ORTHO05D000624 3.0e-06 55.8 85 43.5
Thhalv10002154m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 3.9e-06 55.5 95 35.8
HanXRQChr08g0223251 Helianthus annuus HOM05D000805 ORTHO05D000624 3.9e-06 55.5 78 42.3
MBI04_g33724_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 3.9e-06 55.5 80 45.0
MBI04_g41759_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 3.9e-06 55.5 80 45.0
Oeu021666.1 Olea europaea HOM05D000805 ORTHO05D000624 3.9e-06 55.5 102 38.2
AL4G17840 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 6.6e-06 54.7 80 43.8
Peaxi162Scf00271g00056 Petunia axillaris HOM05D000805 ORTHO05D000624 6.6e-06 54.7 80 42.5
TWI23G0546 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 6.6e-06 54.7 82 46.3
Oeu006088.1 Olea europaea HOM05D000805 ORTHO05D000624 8.6e-06 54.3 80 41.2
TAR629G3054 Trochodendron aralioides HOM05D000805 ORTHO05D000624 8.6e-06 54.3 80 43.8


User provided reference genes

Program Settings