Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 5.3e-78 294.3 148 100.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.1e-74 282.3 149 96.6
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 2.0e-64 249.2 148 87.2
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.2e-63 245.7 148 87.8
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 2.5e-51 205.7 150 72.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 2.7e-45 185.7 147 67.3
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.6e-42 176.4 148 65.5
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 3.6e-42 175.3 161 61.5
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.5e-40 169.9 151 65.6
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.3e-39 166.8 148 62.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 1.7e-39 166.4 149 59.7
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.8e-39 165.6 148 62.8
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 3.7e-39 165.2 102 78.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 4.9e-39 164.9 150 61.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 8.3e-39 164.1 148 60.8
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 8.3e-39 164.1 150 61.3
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.1e-38 163.7 148 63.5
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-38 163.7 126 69.0
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 2.4e-38 162.5 162 56.2
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 3.1e-38 162.2 148 61.5
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.1e-38 161.8 117 70.1
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 7.0e-38 161.0 148 59.5
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 7.0e-38 161.0 102 74.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 9.2e-38 160.6 148 56.8
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.6e-37 159.8 148 59.5
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.6e-37 159.8 150 58.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.6e-37 159.8 102 76.5
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 1.6e-37 159.8 151 57.0
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.0e-37 159.5 98 77.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.7e-37 159.1 129 62.0
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.7e-37 159.1 124 65.3
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.5e-37 158.7 109 75.2
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 5.9e-37 157.9 102 75.5
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 5.9e-37 157.9 102 74.5
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 5.9e-37 157.9 154 59.1
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 7.8e-37 157.5 114 69.3
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 7.8e-37 157.5 157 55.4
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.0e-36 157.1 133 64.7
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 1.0e-36 157.1 102 74.5
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.3e-36 156.8 148 59.5
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 1.7e-36 156.4 109 71.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.8e-36 155.2 98 76.5
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 5.0e-36 154.8 99 76.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 8.6e-36 154.1 150 56.7
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 8.6e-36 154.1 150 56.7
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 8.6e-36 154.1 124 62.9
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 8.6e-36 154.1 111 71.2
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.1e-35 153.7 101 72.3
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.5e-35 153.3 99 74.7
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 2.5e-35 152.5 149 55.7
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 4.3e-35 151.8 151 57.6
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 5.6e-35 151.4 149 58.4
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 5.6e-35 151.4 150 58.0
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.6e-35 151.4 98 73.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 7.3e-35 151.0 98 76.5
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.2e-34 150.2 103 68.9
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 120 61.7
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.1e-34 149.4 138 59.4
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.6e-34 148.7 99 70.7
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 8.0e-34 147.5 152 53.3
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.0e-33 147.1 95 74.7
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.4e-33 146.7 99 73.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 3.0e-33 145.6 108 63.9
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 4.4e-32 141.7 109 67.9
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 7.5e-32 141.0 101 67.3
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 1.3e-31 140.2 117 60.7
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 2.9e-31 139.0 110 63.6
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 2.9e-31 139.0 110 64.5
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 3.7e-31 138.7 124 59.7
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 3.7e-31 138.7 106 65.1
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 6.4e-31 137.9 116 62.1
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 8.3e-31 137.5 120 60.8
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.4e-30 136.7 98 68.4
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.4e-30 136.7 120 63.3
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.9e-30 136.3 129 58.1
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.9e-30 136.3 110 61.8
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.9e-30 136.3 187 46.0
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.4e-30 136.0 121 58.7
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 2.4e-30 136.0 116 61.2
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 3.2e-30 135.6 150 51.3
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 3.2e-30 135.6 150 51.3
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 4.1e-30 135.2 98 68.4
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 4.1e-30 135.2 149 51.0
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 7.0e-30 134.4 98 68.4
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 7.0e-30 134.4 118 56.8
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.2e-29 133.7 141 54.6
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 2.7e-29 132.5 211 40.8
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 3.5e-29 132.1 158 50.0
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 3.5e-29 132.1 120 60.0
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 4.6e-29 131.7 99 65.7
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 6.0e-29 131.3 148 50.0
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 7.8e-29 131.0 92 69.6
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.0e-28 130.6 156 46.8
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.3e-28 130.2 155 48.4
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.7e-28 129.8 112 62.5
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.7e-28 129.8 99 64.6
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 3.0e-28 129.0 149 51.0
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 3.9e-28 128.6 149 49.0
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 3.9e-28 128.6 97 67.0
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 5.0e-28 128.3 147 49.0
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 6.6e-28 127.9 127 56.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 6.6e-28 127.9 99 60.6
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 3.3e-27 125.6 114 57.9
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.1e-25 120.6 126 58.7
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.8e-25 119.8 95 62.1
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 7.5e-24 114.4 74 77.0
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 2.2e-23 112.8 98 64.3
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.6e-21 106.7 203 36.9
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 6.6e-20 101.3 138 41.3
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 1.1e-19 100.5 113 58.4
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.1e-19 100.5 67 67.2
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 2.5e-19 99.4 122 44.3
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 4.3e-19 98.6 55 85.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 6.8e-17 91.3 54 81.5
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.6e-16 89.4 137 37.2
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 3.2e-14 82.4 104 39.4
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.1e-13 79.7 105 52.4
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 3.9e-12 75.5 96 39.6
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 9.5e-11 70.9 46 67.4
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.6e-10 70.1 124 33.9
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 1.3e-07 60.5 96 35.4
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 5.4e-06 55.1 84 44.0


User provided reference genes

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