Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 2.2e-62 242.3 138 100.0
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.8e-42 173.7 114 86.8
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.8e-41 171.4 113 78.8
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 6.3e-41 171.0 114 87.7
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 9.1e-40 167.2 114 86.8
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 9.1e-40 167.2 114 75.4
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 4.6e-23 111.7 113 60.2
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.3e-22 109.4 113 73.5
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.9e-22 108.6 115 58.3
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 7.5e-18 94.4 115 47.0
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 9.8e-18 94.0 119 45.4
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.7e-17 93.2 115 57.4
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 8.3e-17 90.9 116 47.4
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 1.9e-16 89.7 114 47.4
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 4.1e-16 88.6 120 44.2
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.2e-15 87.0 113 46.9
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 1.6e-15 86.7 117 47.9
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.6e-15 86.7 115 50.4
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.3e-14 83.6 117 46.2
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 3.9e-14 82.0 113 46.0
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 3.9e-14 82.0 113 46.0
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 3.9e-14 82.0 113 42.5
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 3.9e-14 82.0 113 42.5
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.9e-13 79.7 128 42.2
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 2.5e-13 79.3 113 39.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.5e-13 79.3 114 45.6
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 3.3e-13 79.0 113 41.6
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.3e-13 79.0 119 38.7
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 4.3e-13 78.6 114 46.5
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 4.3e-13 78.6 113 38.1
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.6e-13 78.2 119 37.8
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 5.6e-13 78.2 113 43.4
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 7.3e-13 77.8 115 43.5
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.2e-12 77.0 113 41.6
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.2e-12 77.0 119 37.0
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.1e-12 76.3 113 38.9
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.1e-11 72.4 113 45.1
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 5.2e-11 71.6 110 40.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 6.8e-11 71.2 119 47.9
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 2.0e-10 69.7 127 35.4
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 2.0e-10 69.7 111 36.9
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 4.4e-10 68.6 114 35.1
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 7.5e-10 67.8 113 35.4
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 2.2e-09 66.2 114 34.2
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.9e-09 65.9 114 39.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-09 65.9 104 44.2
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-09 65.9 104 44.2
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 2.9e-09 65.9 127 34.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 3.7e-09 65.5 113 34.5
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.7e-09 65.5 113 37.2
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 3.7e-09 65.5 130 36.9
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.4e-09 64.7 119 37.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.1e-08 63.9 113 38.1
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.1e-08 63.9 119 37.8
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.4e-08 63.5 113 36.3
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.1e-08 62.0 119 34.5
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 9.2e-08 60.8 51 51.0
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 1.6e-07 60.1 130 33.8
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.6e-07 60.1 129 34.1
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 2.1e-07 59.7 130 36.2
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.1e-07 59.7 111 41.4
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.7e-07 59.3 113 35.4
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 3.5e-07 58.9 119 31.9
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 4.6e-07 58.5 113 37.2
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 7.8e-07 57.8 111 37.8
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.0e-06 57.4 112 36.6
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.0e-06 57.4 111 32.4
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.7e-06 56.6 131 28.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 3.9e-06 55.5 114 39.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 6.6e-06 54.7 146 32.2


User provided reference genes

Program Settings