Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g33680 Fragaria vesca HOM05D008712 ORTHO05D010562 7.1e-47 190.3 97 100.0
FAN24G0151 Fragaria x ananassa HOM05D008712 ORTHO05D010562 7.1e-47 190.3 97 100.0
FAN27G1260 Fragaria x ananassa HOM05D008712 ORTHO05D010562 3.1e-42 174.9 99 91.9
FAN15G2985 Fragaria x ananassa HOM05D008712 ORTHO05D010562 2.9e-40 168.3 98 91.8
FAN20G1804 Fragaria x ananassa HOM05D008712 ORTHO05D010562 4.2e-39 164.5 98 90.8
Prupe.1G429100 Prunus persica HOM05D008712 ORTHO05D010562 4.8e-19 97.8 106 61.3
Sabra14G0014600 Salix brachista HOM05D008712 ORTHO05D010562 1.4e-15 86.3 102 53.9
Potri.002G122200 Populus trichocarpa HOM05D008712 ORTHO05D010562 7.1e-15 84.0 92 57.6
Potri.014G022000 Populus trichocarpa HOM05D008712 ORTHO05D010562 7.1e-15 84.0 103 54.4
Thecc.08G095500 Theobroma cacao HOM05D008712 ORTHO05D010562 2.3e-13 79.0 99 55.6
DCAR_012799 Daucus carota HOM05D008712 ORTHO05D010562 5.1e-13 77.8 88 45.5
Cfa018039 Carpinus fangiana HOM05D008712 ORTHO05D010562 1.3e-11 73.2 103 49.5
Aqoxy6G02843 Aquilegia oxysepala HOM05D008712 ORTHO05D010562 6.3e-11 70.9 88 53.4
COL.COLO4_28577 Corchorus olitorius HOM05D008712 ORTHO05D010562 6.3e-11 70.9 93 54.8
QL02p003416 Quercus lobata HOM05D008712 ORTHO05D010562 6.3e-11 70.9 100 46.0
Glyma.14G086800 Glycine max HOM05D008712 ORTHO05D010562 8.2e-11 70.5 101 44.6
QL02p003421 Quercus lobata HOM05D008712 ORTHO05D010562 2.4e-10 68.9 85 49.4
Haze_18086 Corylus avellana HOM05D008712 ORTHO05D010562 3.1e-10 68.6 109 46.8
Eucgr.F02277 Eucalyptus grandis HOM05D008712 ORTHO05D010562 4.1e-10 68.2 93 51.6
CiPaw.16G035300 Carya illinoinensis HOM05D008712 ORTHO05D010562 1.2e-09 66.6 88 52.3
Cpa.g.sc21.139 Carica papaya HOM05D008712 ORTHO05D010562 1.5e-09 66.2 99 47.5
Duzib041G0707 Durio zibethinus HOM05D008712 ORTHO05D010562 2.6e-09 65.5 110 46.4
Manes.05G178500 Manihot esculenta HOM05D008712 ORTHO05D010562 2.6e-09 65.5 101 46.5
Phvul.001G025300 Phaseolus vulgaris HOM05D008712 ORTHO05D010562 1.0e-08 63.5 97 43.3
Manes.18G042500 Manihot esculenta HOM05D008712 ORTHO05D010562 5.0e-08 61.2 97 45.4
Glyma.17G237600 Glycine max HOM05D008712 ORTHO05D010562 6.5e-08 60.8 101 41.6
Gohir.A01G121600 Gossypium hirsutum HOM05D008712 ORTHO05D010562 8.5e-08 60.5 104 47.1
DCAR_008831 Daucus carota HOM05D008712 ORTHO05D010562 1.1e-07 60.1 95 41.1
Rhsim07G0223700 Rhododendron simsii HOM05D020047 ORTHO05D010562 1.1e-07 60.1 95 42.1
CiPaw.15G050000 Carya illinoinensis HOM05D008712 ORTHO05D010562 1.4e-07 59.7 90 45.6
Lj5g0013994 Lotus japonicus HOM05D008712 ORTHO05D010562 5.5e-07 57.8 97 47.4
ClCG05G020290 Citrullus lanatus HOM05D039893 ORTHO05D010562 9.3e-07 57.0 87 41.4
CsaV3_4G034770 Cucumis sativus L. HOM05D039893 ORTHO05D010562 1.2e-06 56.6 98 40.8
Gorai.009G216300 Gossypium raimondii HOM05D034139 ORTHO05D010562 2.1e-06 55.8 95 46.3
Gohir.D05G209950 Gossypium hirsutum HOM05D034139 ORTHO05D010562 3.6e-06 55.1 95 45.3
Medtr1g018740 Medicago truncatula HOM05D008712 ORTHO05D010562 3.6e-06 55.1 93 43.0
Phvul.009G068600 Phaseolus vulgaris HOM05D008712 ORTHO05D010562 4.6e-06 54.7 97 45.4
Gorai.002G133400 Gossypium raimondii HOM05D008712 ORTHO05D010562 6.1e-06 54.3 104 43.3
THA.LOC109116964 Tarenaya hassleriana HOM05D008712 ORTHO05D010562 7.9e-06 53.9 92 43.5


User provided reference genes

Program Settings