Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g33371 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-62 241.9 123 100.0
FvH4_4g17203 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-36 156.4 119 68.9
FvH4_5g24522 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-33 146.0 104 67.3
FvH4_2g17721 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-31 139.8 101 66.3
FvH4_4g30261 Fragaria vesca HOM05D000003 ORTHO05D000006 4.9e-29 131.3 110 58.2
FvH4_6g18361 Fragaria vesca HOM05D000003 ORTHO05D000022 4.9e-29 131.3 101 64.4
FvH4_3g14411 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-28 129.4 105 61.0
FvH4_4g13392 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-28 129.4 105 61.0
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 6.0e-27 124.4 115 53.9
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-26 123.2 105 58.1
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 1.6e-24 116.3 98 55.1
FvH4_3g19950 Fragaria vesca HOM05D002732 ORTHO05D002955 1.8e-23 112.8 102 53.9
FvH4_5g16792 Fragaria vesca HOM05D000003 ORTHO05D000022 5.9e-22 107.8 93 55.9
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 1.7e-21 106.3 119 42.9
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 1.4e-20 103.2 120 41.7
RcHm_v2.0_Chr1g0334811 Rosa chinensis HOM05D000003 ORTHO05D000022 4.2e-20 101.7 91 50.5
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 5.5e-20 101.3 119 40.3
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.2e-19 100.1 104 46.2
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-19 99.8 102 46.1
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 1.6e-19 99.8 101 49.5
FvH4_1g18562 Fragaria vesca HOM05D000003 ORTHO05D000022 2.1e-19 99.4 101 46.5
FvH4_5g27791 Fragaria vesca HOM05D000003 ORTHO05D000022 6.1e-19 97.8 76 60.5
FvH4_6g27511 Fragaria vesca HOM05D015180 ORTHO05D016296 6.1e-19 97.8 87 52.9
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 4.3e-17 91.7 101 42.6
RcHm_v2.0_Chr1g0374401 Rosa chinensis HOM05D000106 ORTHO05D010272 4.3e-17 91.7 97 46.4
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-16 90.1 111 42.3
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 2.2e-16 89.4 99 43.4
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 2.8e-16 89.0 101 43.6
Prupe.1G509200 Prunus persica HOM05D000003 ORTHO05D000022 2.8e-16 89.0 101 46.5
Prupe.8G128400 Prunus persica HOM05D018000 ORTHO05D017022 6.3e-16 87.8 106 43.4
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.1e-15 87.0 116 41.4
RcHm_v2.0_Chr4g0393821 Rosa chinensis HOM05D000003 ORTHO05D000022 1.8e-15 86.3 105 42.9
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 2.4e-15 85.9 107 37.4
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 3.1e-15 85.5 111 39.6
FvH4_4g02991 Fragaria vesca HOM05D000003 ORTHO05D000022 9.1e-15 84.0 64 57.8
FvH4_3g24081 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-14 83.6 102 46.1
FvH4_6g20891 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-14 83.6 103 42.7
FvH4_6g34981 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-14 83.2 103 35.0
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 2.6e-14 82.4 116 39.7
FvH4_2g12641 Fragaria vesca HOM05D000003 ORTHO05D000022 3.4e-14 82.0 92 45.7
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 7.7e-14 80.9 98 42.9
FvH4_5g19160 Fragaria vesca HOM05D000003 ORTHO05D025552 1.3e-13 80.1 102 44.1
FvH4_6g25081 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-13 80.1 109 39.4
FAN02G0239 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.7e-13 79.7 96 49.0
Prupe.1G168800 Prunus persica HOM05D000003 ORTHO05D000022 2.2e-13 79.3 106 39.6
FvH4_6g42230 Fragaria vesca HOM05D000003 ORTHO05D000022 3.8e-13 78.6 100 38.0
FvH4_5g35301 Fragaria vesca HOM05D011676 ORTHO05D000022 2.5e-12 75.9 65 55.4
RcHm_v2.0_Chr7g0218671 Rosa chinensis HOM05D000003 ORTHO05D000022 1.2e-11 73.6 90 40.0
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 2.7e-11 72.4 97 39.2
FAN18G3905 Fragaria x ananassa HOM05D000003 ORTHO05D000022 3.6e-11 72.0 94 41.5
Prupe.6G185900 Prunus persica HOM05D000003 ORTHO05D000022 3.6e-11 72.0 90 41.1
Hund17128 Selenicereus undatus HOM05D000003 ORTHO05D000022 7.9e-11 70.9 84 41.7
FvH4_2g32021 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-10 70.5 115 33.9
Hund03119 Selenicereus undatus HOM05D000003 ORTHO05D050926 1.0e-10 70.5 89 38.2
FvH4_5g30341 Fragaria vesca HOM05D000003 ORTHO05D000022 2.3e-10 69.3 105 34.3
FAN19G1700 Fragaria x ananassa HOM05D000003 ORTHO05D000022 5.1e-10 68.2 64 48.4
FAN10G1648 Fragaria x ananassa HOM05D011676 ORTHO05D000022 8.8e-10 67.4 53 64.2
FAN20G0282 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.1e-09 67.0 63 49.2
SEGI_30262 Sequoiadendron giganteum HOM05D000399 ORTHO05D000022 1.1e-09 67.0 106 34.9
FvH4_2g19001 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-09 66.6 109 34.9
FvH4_6g18903 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-09 66.6 71 40.8
FAN09G0133 Fragaria x ananassa HOM05D011676 ORTHO05D000022 1.5e-09 66.6 61 55.7
FAN16G0806 Fragaria x ananassa HOM05D011676 ORTHO05D011994 1.5e-09 66.6 61 59.0
FAN16G2333 Fragaria x ananassa HOM05D011676 ORTHO05D011994 1.5e-09 66.6 61 59.0
FAN27G1499 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.0e-09 66.2 61 55.7
FAN06G0486 Fragaria x ananassa HOM05D011676 ORTHO05D000022 2.6e-09 65.9 53 60.4
FAN06G4537 Fragaria x ananassa HOM05D011676 ORTHO05D000022 2.6e-09 65.9 53 60.4
Hund07702 Selenicereus undatus HOM05D001688 ORTHO05D001571 2.6e-09 65.9 91 38.5
SEGI_20826 Sequoiadendron giganteum HOM05D000208 ORTHO05D000022 3.3e-09 65.5 114 36.8
FAN20G2487 Fragaria x ananassa HOM05D011676 ORTHO05D000022 4.4e-09 65.1 53 56.6
Prupe.7G010700 Prunus persica HOM05D000003 ORTHO05D000022 5.7e-09 64.7 101 37.6
Aqoxy3G01725 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 9.7e-09 63.9 120 36.7
Aqoxy4G00320 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 9.7e-09 63.9 120 36.7
Aqoxy2G01822 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.7e-08 63.2 120 36.7
FvH4_5g30301 Fragaria vesca HOM05D000003 ORTHO05D000022 1.7e-08 63.2 61 42.6
FAN05G5215 Fragaria x ananassa HOM05D000087 ORTHO05D001941 1.7e-08 63.2 52 53.8
Prupe.1G189700 Prunus persica HOM05D000003 ORTHO05D000022 1.7e-08 63.2 104 36.5
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 1.7e-08 63.2 89 37.1
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 2.8e-08 62.4 110 34.5
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 2.8e-08 62.4 99 36.4
SEGI_14515 Sequoiadendron giganteum HOM05D004798 ORTHO05D005809 2.8e-08 62.4 117 33.3
FAN03G2427 Fragaria x ananassa HOM05D000003 ORTHO05D000022 3.7e-08 62.0 56 50.0
FAN09G2139 Fragaria x ananassa HOM05D000003 ORTHO05D000022 3.7e-08 62.0 69 46.4
PSO017G2370 Papaver somniferum HOM05D000003 ORTHO05D001026 3.7e-08 62.0 101 34.7
SEGI_39148 Sequoiadendron giganteum HOM05D000352 ORTHO05D000260 3.7e-08 62.0 72 40.3
AUR62043150 Chenopodium quinoa HOM05D000058 ORTHO05D000077 4.8e-08 61.6 114 37.7
Aqoxy1G04216 Aquilegia oxysepala HOM05D017309 ORTHO05D000022 6.3e-08 61.2 101 35.6
TAR625G1453 Trochodendron aralioides HOM05D000650 ORTHO05D010020 6.3e-08 61.2 98 37.8
Aqoxy44s001 Aquilegia oxysepala HOM05D017309 ORTHO05D000022 8.2e-08 60.8 101 35.6
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 8.2e-08 60.8 100 39.0
FvH4_5g32912 Fragaria vesca HOM05D000003 ORTHO05D000022 8.2e-08 60.8 96 33.3
SEGI_23191 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 8.2e-08 60.8 102 35.3
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-07 60.5 106 34.9
Aqoxy4G01321 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.1e-07 60.5 91 36.3
Aqoxy5G02742 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 1.1e-07 60.5 91 36.3
PSO782G4220 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.5 83 41.0
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 1.1e-07 60.5 113 32.7
Nitab4.5_0000923g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-07 60.1 90 35.6
PSO339G0911 Papaver somniferum HOM05D000003 ORTHO05D000022 1.4e-07 60.1 82 39.0
PSO782G1635 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 60.1 86 39.5
Hund11366 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-07 60.1 82 39.0
MBI14_g13525_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-07 59.7 97 37.1
PSO384G2089 Papaver somniferum HOM05D000155 ORTHO05D000022 1.8e-07 59.7 88 36.4
Aqoxy3G01695 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 2.4e-07 59.3 82 35.4
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 2.4e-07 59.3 99 36.4
MBI15_g37777_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-07 59.3 90 36.7
Nitab4.5_0011737g0010 Nicotiana tabacum HOM05D012063 ORTHO05D000022 2.4e-07 59.3 74 40.5
PSO447G0188 Papaver somniferum HOM05D003407 ORTHO05D001026 2.4e-07 59.3 79 39.2
Aqoxy3G03539 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 3.1e-07 58.9 117 29.9
COL.COLO4_30555 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.1e-07 58.9 85 35.3
Nitab4.5_0008049g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.1e-07 58.9 97 37.1
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 3.1e-07 58.9 113 32.7
FAN01G1336 Fragaria x ananassa HOM05D000003 ORTHO05D000022 4.1e-07 58.5 42 59.5
FAN05G3765 Fragaria x ananassa HOM05D040058 ORTHO05D000022 4.1e-07 58.5 73 42.5
MBI15_g21039_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.1e-07 58.5 112 33.0
PSO339G5198 Papaver somniferum HOM05D000155 ORTHO05D000022 4.1e-07 58.5 71 43.7
Hund04646 Selenicereus undatus HOM05D032857 ORTHO05D000022 4.1e-07 58.5 88 33.0
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-07 58.2 100 33.0
FvH4_3g35341 Fragaria vesca HOM05D000003 ORTHO05D000022 5.3e-07 58.2 86 38.4
FAN12G0048 Fragaria x ananassa HOM05D000003 ORTHO05D000022 5.3e-07 58.2 66 47.0
MBI14_g43302_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.3e-07 58.2 89 40.4
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 5.3e-07 58.2 89 34.8
LjContig00141g0007313 Lotus japonicus HOM05D000003 ORTHO05D000004 7.0e-07 57.8 90 40.0
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 7.0e-07 57.8 84 39.3
FAN01G0238 Fragaria x ananassa HOM05D010151 ORTHO05D000022 9.1e-07 57.4 68 44.1
FAN06G2017 Fragaria x ananassa HOM05D000003 ORTHO05D000022 9.1e-07 57.4 61 50.8
FAN21G0109 Fragaria x ananassa HOM05D010151 ORTHO05D000022 9.1e-07 57.4 73 43.8
MBI07_g23924_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.1e-07 57.4 117 35.9
PSO675G1658 Papaver somniferum HOM05D000003 ORTHO05D000004 9.1e-07 57.4 79 38.0
SEGI_15436 Sequoiadendron giganteum HOM05D001690 ORTHO05D013089 9.1e-07 57.4 97 34.0
VMungo0540G0582 Vigna mungo HOM05D000774 ORTHO05D000602 9.1e-07 57.4 102 30.4
MBI10_g18257_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.0 113 32.7
SEGI_39188 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.2e-06 57.0 95 35.8
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-06 56.6 113 36.3
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 118 33.9
Atru.chr8.2517 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-06 56.6 91 36.3
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 1.5e-06 56.6 112 35.7
FAN24G0733 Fragaria x ananassa HOM05D029299 ORTHO05D046398 1.5e-06 56.6 50 54.0
Lj4g0025065 Lotus japonicus HOM05D000155 ORTHO05D000022 1.5e-06 56.6 93 36.6
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-06 56.6 97 36.1
SEGI_39928 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.5e-06 56.6 91 34.1
Aqoxy1G03422 Aquilegia oxysepala HOM05D000650 ORTHO05D000022 2.0e-06 56.2 87 35.6
MBI01_g18510_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.2 96 37.5
MBI16_g36778_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.2 96 34.4
MD16G1087400 Malus domestica HOM05D001690 ORTHO05D002627 2.0e-06 56.2 102 37.3
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 2.0e-06 56.2 98 34.7
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-06 56.2 82 39.0
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-06 55.8 100 34.0
FAN10G3451 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.6e-06 55.8 104 27.9
FAN18G1264 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.6e-06 55.8 73 35.6
MBI17_g12077_MAGBIO Magnolia biondii HOM05D000556 ORTHO05D000404 2.6e-06 55.8 116 35.3
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 2.6e-06 55.8 90 36.7
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 2.6e-06 55.8 83 34.9
Ah.01g008030 Amaranthus hybridus HOM05D000003 ORTHO05D006737 3.4e-06 55.5 93 33.3
Aqoxy2G02120 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.4e-06 55.5 66 43.9
EL10Ac8g19391 Beta vulgaris HOM05D009702 ORTHO05D000004 3.4e-06 55.5 88 35.2
MBI01_g30858_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.5 102 32.4
MBI18_g13610_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.5 96 32.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.4e-06 55.5 90 35.6
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 3.4e-06 55.5 110 38.2
Prupe.2G140300 Prunus persica HOM05D000003 ORTHO05D000022 3.4e-06 55.5 110 30.9
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 4.5e-06 55.1 90 33.3
BolC8t51239H Brassica oleracea HOM05D001239 ORTHO05D000925 4.5e-06 55.1 80 38.8
FAN05G5414 Fragaria x ananassa HOM05D040058 ORTHO05D000022 4.5e-06 55.1 69 42.0
MBI16_g09813_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.1 114 28.1
Nitab4.5_0003368g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.5e-06 55.1 82 36.6
TAR630G0005 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.5e-06 55.1 117 33.3
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 5.9e-06 54.7 89 41.6
MBI04_g35050_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 54.7 111 33.3
MBI18_g46677_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 54.7 81 38.3
PSO832G0413 Papaver somniferum HOM05D000155 ORTHO05D000022 5.9e-06 54.7 107 36.4
Peaxi162Scf00223g00111 Petunia axillaris HOM05D000155 ORTHO05D000022 5.9e-06 54.7 97 33.0
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-06 54.3 101 36.6
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-06 54.3 100 33.0
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 7.7e-06 54.3 101 34.7
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 7.7e-06 54.3 83 34.9
MBI05_g14865_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.3 97 32.0
MBI17_g43446_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.3 81 37.0
PSO063G1239 Papaver somniferum HOM05D000155 ORTHO05D000022 7.7e-06 54.3 64 35.9
QL01p018278 Quercus lobata HOM05D000003 ORTHO05D000022 7.7e-06 54.3 98 34.7
TAR577G0001 Trochodendron aralioides HOM05D000155 ORTHO05D000022 7.7e-06 54.3 116 34.5


User provided reference genes

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