Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 5.9e-91 337.4 160 100.0
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.5e-73 278.9 133 97.0
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 5.2e-71 271.2 144 93.1
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 7.8e-67 257.3 156 78.2
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 2.4e-47 192.6 164 58.5
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 8.9e-47 190.7 164 54.9
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.2e-46 190.3 164 57.3
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 2.6e-46 189.1 164 57.3
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 2.6e-46 189.1 164 56.1
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 3.4e-46 188.7 164 56.7
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 7.6e-46 187.6 164 57.3
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.6e-46 187.6 164 54.3
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 7.6e-46 187.6 164 54.9
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 1.3e-45 186.8 164 54.3
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 1.3e-45 186.8 164 56.7
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.3e-45 186.8 164 56.7
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.7e-45 186.4 164 53.7
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 2.2e-45 186.0 164 55.5
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 2.9e-45 185.7 164 55.5
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 3.8e-45 185.3 164 56.1
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 4.9e-45 184.9 164 54.9
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 4.9e-45 184.9 164 54.9
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 4.9e-45 184.9 164 56.1
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 4.9e-45 184.9 164 54.9
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 4.9e-45 184.9 164 55.5
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 4.9e-45 184.9 164 53.7
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 6.4e-45 184.5 164 55.5
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.4e-45 184.1 164 55.5
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 3.2e-44 182.2 164 53.7
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 3.2e-44 182.2 162 56.2
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 3.2e-44 182.2 162 56.2
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 3.2e-44 182.2 162 56.2
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 4.2e-44 181.8 164 53.0
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 4.2e-44 181.8 162 54.3
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 5.4e-44 181.4 164 54.3
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 5.4e-44 181.4 164 53.0
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 7.1e-44 181.0 164 53.0
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 7.1e-44 181.0 166 52.4
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 7.1e-44 181.0 164 55.5
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.2e-43 180.3 164 52.4
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.2e-43 180.3 164 53.0
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.6e-43 179.9 164 53.7
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.6e-43 179.9 161 55.3
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 1.6e-43 179.9 164 52.4
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.6e-43 179.9 164 53.7
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 2.1e-43 179.5 164 51.8
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 2.1e-43 179.5 164 51.8
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 2.7e-43 179.1 164 52.4
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 4.6e-43 178.3 164 52.4
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.0e-42 177.2 165 53.9
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.0e-42 177.2 177 52.5
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.3e-42 176.8 164 53.7
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 1.7e-42 176.4 166 50.6
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.7e-42 176.4 169 52.7
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 2.3e-42 176.0 164 53.7
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 3.0e-42 175.6 165 53.9
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 3.0e-42 175.6 164 53.0
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 3.0e-42 175.6 164 52.4
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 3.9e-42 175.3 165 53.3
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 3.9e-42 175.3 165 53.3
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 8.7e-42 174.1 165 53.3
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 8.7e-42 174.1 165 53.3
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 8.7e-42 174.1 165 53.3
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 8.7e-42 174.1 164 52.4
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.1e-41 173.7 165 52.7
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.1e-41 173.7 165 52.7
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 1.1e-41 173.7 162 53.1
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.9e-41 172.9 164 52.4
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.5e-41 172.6 164 50.0
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 3.3e-41 172.2 167 49.1
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 4.3e-41 171.8 162 50.6
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 7.3e-41 171.0 164 51.2
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 9.6e-41 170.6 165 52.7
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 9.6e-41 170.6 165 52.1
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 1.2e-40 170.2 164 51.2
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 1.2e-40 170.2 164 51.2
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 1.2e-40 170.2 164 51.2
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 1.6e-40 169.9 165 52.7
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 2.1e-40 169.5 165 52.1
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 2.1e-40 169.5 164 50.0
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 2.8e-40 169.1 167 49.7
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 4.7e-40 168.3 164 50.0
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 6.2e-40 167.9 165 48.5
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 6.2e-40 167.9 186 48.9
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 1.4e-39 166.8 164 49.4
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.4e-39 166.8 164 47.6
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 2.4e-39 166.0 164 49.4
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 2.4e-39 166.0 175 50.3
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 4.0e-39 165.2 164 50.6
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 1.5e-38 163.3 164 47.0
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 2.6e-38 162.5 163 48.5
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 5.8e-38 161.4 163 48.5
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 1.3e-37 160.2 164 47.6
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 1.7e-37 159.8 162 49.4
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.2e-37 159.5 158 48.1
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.2e-37 159.5 164 47.0
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 3.8e-37 158.7 164 48.2
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 4.9e-37 158.3 187 46.0
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 4.2e-36 155.2 200 41.5
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 7.1e-36 154.5 164 47.0
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 7.1e-36 154.5 164 47.0
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 1.6e-35 153.3 164 47.0
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 2.7e-35 152.5 164 48.8
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 1.0e-34 150.6 163 46.0
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 3.0e-34 149.1 162 47.5
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 3.9e-34 148.7 165 47.3
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.9e-34 148.7 145 51.0
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 3.3e-33 145.6 186 43.5
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 3.3e-33 145.6 216 38.0
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 7.3e-33 144.4 134 52.2
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.3e-32 143.7 160 46.2
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 6.2e-32 141.4 164 44.5
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 1.1e-31 140.6 127 54.3
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 1.8e-31 139.8 164 44.5
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 4.0e-31 138.7 165 44.2
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 4.5e-30 135.2 134 51.5
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 9.9e-30 134.0 176 41.5
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.9e-29 132.5 126 51.6
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 1.1e-28 130.6 164 38.4
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 2.4e-28 129.4 164 41.5
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.2e-27 127.1 132 47.0
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.6e-27 126.7 131 47.3
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 4.6e-27 125.2 130 49.2
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 7.9e-27 124.4 178 38.8
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 4.3e-25 118.6 160 38.8
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.6e-25 118.2 130 44.6
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.6e-24 116.7 165 38.8
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 1.1e-23 114.0 95 55.8
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 2.6e-22 109.4 94 53.2
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 2.6e-22 109.4 94 53.2
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.3e-21 107.1 116 47.4
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 7.1e-20 101.3 160 35.0
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 1.0e-18 97.4 132 40.9
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.0e-18 97.4 161 33.5
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 3.9e-18 95.5 99 48.5
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.5e-17 93.6 128 39.1
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 5.6e-17 91.7 95 48.4
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.6e-16 90.1 161 31.7
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 1.4e-15 87.0 144 38.9
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.5e-14 82.0 93 45.2
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.9e-13 78.6 124 33.1
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 2.7e-11 72.8 66 51.5
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.3e-10 70.5 172 30.2
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 1.8e-10 70.1 105 39.0
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 4.3e-09 65.5 114 38.6
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 1.3e-08 63.9 108 36.1
COL.COLO4_30599 Corchorus olitorius HOM05D004267 ORTHO05D044750 1.3e-08 63.9 130 33.1
Thecc.06G107200 Theobroma cacao HOM05D004267 ORTHO05D044750 6.3e-08 61.6 128 30.5
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.9e-07 58.2 82 41.5
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.9e-07 58.2 82 41.5
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 9.0e-07 57.8 51 51.0
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.2e-06 57.4 85 40.0


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