Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g31540 Fragaria vesca HOM05D012314 ORTHO05D013875 1.8e-159 565.8 280 100.0
FvH4_2g31590 Fragaria vesca HOM05D012314 ORTHO05D013875 1.4e-90 337.0 284 63.7
FAN24G2222 Fragaria x ananassa HOM05D012314 ORTHO05D013875 1.8e-90 336.7 284 63.7
FAN20G1989 Fragaria x ananassa HOM05D012314 ORTHO05D013875 5.5e-84 315.1 199 81.9
FvH4_2g31591 Fragaria vesca HOM05D012314 ORTHO05D013875 6.1e-75 285.0 264 60.2
FAN27G1806 Fragaria x ananassa HOM05D012314 ORTHO05D013875 4.0e-66 255.8 280 53.9
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 5.5e-60 235.3 202 64.9
FvH4_2g31550 Fragaria vesca HOM05D012314 ORTHO05D013875 3.2e-47 193.0 210 53.8
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 7.0e-39 165.2 194 54.1
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 8.9e-34 148.3 346 34.1
FAN20G0580 Fragaria x ananassa HOM05D000786 ORTHO05D013875 1.4e-31 141.0 273 36.6
FAN27G0041 Fragaria x ananassa HOM05D000786 ORTHO05D013875 2.1e-30 137.1 273 35.9
Prupe.1G409200 Prunus persica HOM05D012314 ORTHO05D013875 1.0e-29 134.8 263 36.5
Sabra13G0108300 Salix brachista HOM05D000001 ORTHO05D000424 5.2e-18 95.9 262 29.8
Potri.013G130500 Populus trichocarpa HOM05D011029 ORTHO05D011115 9.9e-17 91.7 251 31.5
FvH4_2g31530 Fragaria vesca HOM05D000786 ORTHO05D013875 2.9e-16 90.1 236 30.9
CsaV3_6G008100 Cucumis sativus L. HOM05D002105 ORTHO05D001271 2.4e-15 87.0 277 27.8
Sabra13G0109800 Salix brachista HOM05D000001 ORTHO05D011115 1.6e-14 84.3 236 28.8
Sed0016612 Sechium edule HOM05D002105 ORTHO05D011115 6.6e-13 79.0 253 26.9
Cpa.g.sc83.45 Carica papaya HOM05D011029 ORTHO05D011115 9.6e-12 75.1 261 29.9
Haze_13183 Corylus avellana HOM05D011029 ORTHO05D011115 6.2e-11 72.4 191 29.8
MELO3C022325.2 Cucumis melo HOM05D002105 ORTHO05D011115 3.1e-10 70.1 268 26.1
CsaV3_6G008110 Cucumis sativus L. HOM05D011029 ORTHO05D011115 4.0e-10 69.7 90 44.4
Haze_13182 Corylus avellana HOM05D002105 ORTHO05D001271 5.3e-10 69.3 335 25.4
MELO3C022324.2 Cucumis melo HOM05D011029 ORTHO05D011115 9.0e-10 68.6 90 43.3
ClCG06G002050 Citrullus lanatus HOM05D002105 ORTHO05D011115 2.0e-09 67.4 85 43.5
PGR042G3221 Punica granatum HOM05D002105 ORTHO05D001271 2.6e-09 67.0 264 28.0
PGR042G3749 Punica granatum HOM05D002105 ORTHO05D001271 4.4e-09 66.2 264 26.5
MELO3C035705.2 Cucumis melo HOM05D011029 ORTHO05D011115 7.6e-09 65.5 235 28.5
Manes.18G145698 Manihot esculenta HOM05D012314 ORTHO05D013875 7.6e-09 65.5 266 26.7
FvH4_2g31541 Fragaria vesca HOM05D012314 ORTHO05D045948 1.3e-08 64.7 74 50.0
COL.COLO4_07399 Corchorus olitorius HOM05D011029 ORTHO05D011115 3.8e-08 63.2 237 26.2
PGR042G0540 Punica granatum HOM05D002105 ORTHO05D001271 3.8e-08 63.2 259 25.5
Atru.chr6.2981 Acer truncatum HOM05D002105 ORTHO05D001271 1.1e-07 61.6 272 28.7
GSVIVG01020845001 Vitis vinifera HOM05D002105 ORTHO05D013875 1.1e-07 61.6 115 33.9
Gohir.A02G018501 Gossypium hirsutum HOM05D011029 ORTHO05D011115 2.4e-07 60.5 250 28.8
TWI73G0817 Tripterygium wilfordii HOM05D011029 ORTHO05D011115 2.4e-07 60.5 207 30.4
MD08G1065000 Malus domestica HOM05D012314 ORTHO05D013875 3.2e-07 60.1 112 42.9
FAN24G1893 Fragaria x ananassa HOM05D000786 ORTHO05D000779 4.2e-07 59.7 89 41.6
MD08G1065100 Malus domestica HOM05D012314 ORTHO05D013875 9.3e-07 58.5 104 40.4
CsaV3_6G008120 Cucumis sativus L. HOM05D002105 ORTHO05D001271 3.5e-06 56.6 74 37.8


User provided reference genes

Program Settings