Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 1.5e-59 232.6 118 100.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 1.9e-54 215.7 118 93.2
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 3.0e-47 191.8 119 83.2
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 5.2e-44 181.0 116 77.6
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 6.8e-44 180.6 118 77.1
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 1.6e-37 159.5 117 71.8
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 6.8e-36 154.1 117 70.1
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 5.8e-35 151.0 119 67.2
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 2.2e-34 149.1 111 71.2
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 4.9e-34 147.9 118 69.5
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 6.4e-34 147.5 108 67.6
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 7.1e-33 144.1 111 68.5
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 1.6e-32 142.9 114 67.5
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 6.0e-32 141.0 107 67.3
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 7.8e-32 140.6 111 69.4
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 1.7e-31 139.4 105 72.4
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 1.1e-30 136.7 104 66.3
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 5.6e-30 134.4 105 64.8
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 9.6e-30 133.7 106 66.0
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 1.6e-29 132.9 112 64.3
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 2.1e-29 132.5 115 59.1
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 2.1e-29 132.5 115 62.6
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 4.7e-29 131.3 111 64.9
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 1.4e-28 129.8 102 65.7
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 3.1e-28 128.6 103 67.0
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 3.1e-28 128.6 103 67.0
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 4.0e-28 128.3 111 64.0
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 4.0e-28 128.3 109 64.2
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 4.0e-28 128.3 112 61.6
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 6.9e-28 127.5 108 63.0
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 2.6e-27 125.6 115 55.7
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 4.4e-27 124.8 115 55.7
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 5.8e-27 124.4 112 61.6
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 1.7e-26 122.9 111 58.6
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 1.7e-26 122.9 111 58.6
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 1.7e-26 122.9 111 58.6
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 2.2e-26 122.5 109 62.4
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 2.9e-26 122.1 111 60.4
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 3.8e-26 121.7 111 60.4
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 3.8e-26 121.7 112 59.8
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 4.9e-26 121.3 111 56.8
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 6.4e-26 120.9 114 57.9
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 8.4e-26 120.6 112 58.0
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 1.1e-25 120.2 99 64.6
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 1.1e-25 120.2 101 61.4
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 1.9e-25 119.4 100 63.0
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 4.2e-25 118.2 110 60.0
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 5.4e-25 117.9 105 61.0
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 7.1e-25 117.5 115 53.0
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 1.2e-24 116.7 101 66.3
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 1.6e-24 116.3 112 56.2
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 1.6e-24 116.3 99 63.6
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 2.1e-24 115.9 111 54.1
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 6.0e-24 114.4 111 57.7
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 6.0e-24 114.4 111 53.2
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 7.8e-24 114.0 106 57.5
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 7.8e-24 114.0 91 63.7
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 8.7e-23 110.5 102 61.8
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 1.1e-22 110.2 111 57.7
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 1.1e-22 110.2 111 54.1
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 3.3e-22 108.6 105 57.1
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-22 107.5 108 54.6
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 1.6e-21 106.3 110 50.9
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 1.1e-20 103.6 108 52.8
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 1.1e-20 103.6 111 46.8
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 3.1e-20 102.1 107 51.4
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 3.1e-20 102.1 107 51.4
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 4.0e-20 101.7 103 54.4
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 4.0e-20 101.7 92 59.8
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 5.3e-20 101.3 104 51.9
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 5.3e-20 101.3 104 51.9
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 5.3e-20 101.3 99 52.5
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 9.0e-20 100.5 104 51.9
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 1.5e-19 99.8 93 57.0
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 5.8e-19 97.8 102 52.9
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 1.3e-18 96.7 103 52.4
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 1.7e-18 96.3 90 58.9
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 1.7e-18 96.3 103 51.5
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 2.2e-18 95.9 102 50.0
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 2.2e-18 95.9 111 51.4
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 1.1e-17 93.6 112 48.2
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 1.4e-17 93.2 103 52.4
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 3.2e-17 92.0 111 46.8
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 4.2e-17 91.7 106 49.1
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 5.4e-17 91.3 113 52.2
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 2.1e-16 89.4 106 47.2
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 6.0e-16 87.8 112 49.1
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 7.9e-16 87.4 78 60.3
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 7.9e-16 87.4 104 47.1
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 7.9e-16 87.4 104 46.2
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 3.0e-15 85.5 79 60.8
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 4.3e-14 81.6 101 45.5
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 9.6e-14 80.5 148 39.9
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 2.8e-13 79.0 112 42.9
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 9.0e-12 73.9 101 40.6
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 4.5e-11 71.6 72 55.6
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.9e-10 68.9 73 54.8
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 6.0e-08 61.2 55 54.5
BcaB01g04756 Brassica carinata HOM05D007692 ORTHO05D009696 2.5e-06 55.8 42 57.1


User provided reference genes

Program Settings