Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g30621 Fragaria vesca HOM05D008133 ORTHO05D009449 4.5e-55 217.6 106 100.0
FvH4_5g31281 Fragaria vesca HOM05D008133 ORTHO05D009449 4.2e-45 184.5 139 71.2
FAN26G2609 Fragaria x ananassa HOM05D008133 ORTHO05D009449 2.0e-23 112.5 69 72.5
RcHm_v2.0_Chr7g0223051 Rosa chinensis HOM05D000003 ORTHO05D009449 3.9e-22 108.2 139 42.4
RcHm_v2.0_Chr5g0040301 Rosa chinensis HOM05D008133 ORTHO05D009449 1.6e-20 102.8 71 67.6
FAN21G3538 Fragaria x ananassa HOM05D008133 ORTHO05D009449 5.4e-16 87.8 71 59.2
FAN17G2573 Fragaria x ananassa HOM05D000474 ORTHO05D035089 3.5e-15 85.1 66 57.6
FAN03G2847 Fragaria x ananassa HOM05D008133 ORTHO05D009449 1.3e-14 83.2 51 68.6
FAN27G3045 Fragaria x ananassa HOM05D001345 ORTHO05D001190 3.0e-14 82.0 48 77.1
RcHm_v2.0_Chr4g0415471 Rosa chinensis HOM05D008133 ORTHO05D009449 1.2e-12 76.6 63 52.4
RcHm_v2.0_Chr2g0141951 Rosa chinensis HOM05D000023 ORTHO05D000014 3.1e-11 72.0 70 47.1
FvH4_3g43651 Fragaria vesca HOM05D008133 ORTHO05D009449 5.2e-11 71.2 70 44.3
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 5.2e-11 71.2 72 47.2
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 2.0e-10 69.3 72 47.2
RcHm_v2.0_Chr6g0277111 Rosa chinensis HOM05D000003 ORTHO05D000004 7.6e-10 67.4 70 42.9
FvH4_2g06831 Fragaria vesca HOM05D011824 ORTHO05D035622 9.9e-10 67.0 70 48.6
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 1.3e-09 66.6 52 57.7
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 3.8e-09 65.1 69 44.9
FAN13G2528 Fragaria x ananassa HOM05D027595 ORTHO05D009449 4.9e-09 64.7 50 54.0
RcHm_v2.0_Chr1g0367181 Rosa chinensis HOM05D017965 ORTHO05D009449 4.9e-09 64.7 133 31.6
RcHm_v2.0_Chr5g0040851 Rosa chinensis HOM05D000003 ORTHO05D000004 4.9e-09 64.7 133 32.3
FvH4_4g06793 Fragaria vesca HOM05D000003 ORTHO05D000004 8.4e-09 63.9 72 44.4
Prupe.3G190000 Prunus persica HOM05D008133 ORTHO05D009449 1.1e-08 63.5 70 41.4
FvH4_6g19041 Fragaria vesca HOM05D027595 ORTHO05D045540 1.4e-08 63.2 50 58.0
FvH4_1g23791 Fragaria vesca HOM05D008133 ORTHO05D009449 1.9e-08 62.8 72 43.1
FAN01G1363 Fragaria x ananassa HOM05D011624 ORTHO05D014221 2.4e-08 62.4 107 32.7
RcHm_v2.0_Chr4g0398081 Rosa chinensis HOM05D008133 ORTHO05D009449 3.2e-08 62.0 83 41.0
RcHm_v2.0_Chr1g0346021 Rosa chinensis HOM05D008133 ORTHO05D009449 5.4e-08 61.2 138 30.4
FvH4_5g35622 Fragaria vesca HOM05D000003 ORTHO05D014221 9.2e-08 60.5 69 39.1
FvH4_1g29471 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-07 60.1 67 43.3
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 3.5e-07 58.5 102 33.3
RcHm_v2.0_Chr1g0344541 Rosa chinensis HOM05D000003 ORTHO05D000004 4.6e-07 58.2 65 43.1
Prupe.2G216600 Prunus persica HOM05D008133 ORTHO05D009449 6.0e-07 57.8 74 37.8
Prupe.7G083900 Prunus persica HOM05D008133 ORTHO05D009449 7.8e-07 57.4 69 39.1
FvH4_5g08801 Fragaria vesca HOM05D000003 ORTHO05D000004 1.3e-06 56.6 68 36.8
Prupe.8G042700 Prunus persica HOM05D000003 ORTHO05D009449 1.3e-06 56.6 138 29.7
FvH4_2g34753 Fragaria vesca HOM05D000003 ORTHO05D014221 2.3e-06 55.8 52 44.2
FvH4_3g24291 Fragaria vesca HOM05D008133 ORTHO05D009449 2.3e-06 55.8 52 51.9
FvH4_5g26254 Fragaria vesca HOM05D011824 ORTHO05D009449 3.9e-06 55.1 59 42.4
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 5.1e-06 54.7 72 34.7
FvH4_4g25931 Fragaria vesca HOM05D011624 ORTHO05D014221 8.6e-06 53.9 68 35.3


User provided reference genes

Program Settings