Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g27930 Fragaria vesca HOM05D019328 ORTHO05D029455 1.6e-160 569.3 278 100.0
FAN09G3235 Fragaria x ananassa HOM05D019328 ORTHO05D029455 3.8e-138 495.0 267 90.6
FAN16G1029 Fragaria x ananassa HOM05D019328 ORTHO05D029455 4.4e-134 481.5 267 89.1
FvH4_7g10250 Fragaria vesca HOM05D019328 ORTHO05D029455 2.5e-81 306.2 184 83.7
FvH4_4g09500 Fragaria vesca HOM05D038035 ORTHO05D029632 7.5e-17 92.0 178 33.7
FAN25G0414 Fragaria x ananassa HOM05D019328 ORTHO05D029632 4.1e-15 86.3 125 35.2
Thhalv10010633m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 3.3e-12 76.6 253 25.3
Os03g0212300 Oryza sativa ssp. japonica HOM05D042509 ORTHO05D000088 3.3e-12 76.6 109 42.2
FvH4_2g09450 Fragaria vesca HOM05D019328 ORTHO05D198348 1.2e-11 74.7 110 38.2
FAN27G1325 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.6e-11 73.2 122 36.9
FvH4_2g06970 Fragaria vesca HOM05D000823 ORTHO05D000088 8.0e-11 72.0 252 25.4
FAN16G1522 Fragaria x ananassa HOM05D038035 ORTHO05D029632 8.0e-11 72.0 169 30.8
Cfa004223 Carpinus fangiana HOM05D000823 ORTHO05D000088 1.1e-10 71.6 248 25.0
FAN15G3650 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.4e-10 71.2 250 25.2
FvH4_2g07300 Fragaria vesca HOM05D000823 ORTHO05D000088 2.3e-10 70.5 107 37.4
FAN25G0627 Fragaria x ananassa HOM05D038035 ORTHO05D029632 2.3e-10 70.5 86 39.5
SGA_v2.0_scaffold24G10573 Striga asiatica HOM05D000823 ORTHO05D000088 6.8e-10 68.9 111 30.6
A03p63270 Brassica napus HOM05D006628 ORTHO05D000088 1.5e-09 67.8 234 26.9
RcHm_v2.0_Chr6g0259881 Rosa chinensis HOM05D000823 ORTHO05D000088 1.5e-09 67.8 109 36.7
RcHm_v2.0_Chr6g0259241 Rosa chinensis HOM05D000823 ORTHO05D000088 2.0e-09 67.4 244 25.4
QL09p026053 Quercus lobata HOM05D000395 ORTHO05D000088 3.4e-09 66.6 249 27.3
BcaC01g06061 Brassica carinata HOM05D006628 ORTHO05D000088 4.4e-09 66.2 257 24.5
Thhalv10000999m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 5.8e-09 65.9 246 26.4
PGR102G2553 Punica granatum HOM05D000823 ORTHO05D000088 5.8e-09 65.9 253 24.9
SEGI_02705 Sequoiadendron giganteum HOM05D000823 ORTHO05D006479 5.8e-09 65.9 307 22.5
TAR376G0237 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.3e-08 64.7 102 32.4
BcaC04g23179 Brassica carinata HOM05D000823 ORTHO05D000088 1.7e-08 64.3 115 37.4
Sed0003667 Sechium edule HOM05D000395 ORTHO05D000088 3.7e-08 63.2 103 35.0
Sed0024365 Sechium edule HOM05D000395 ORTHO05D000088 3.7e-08 63.2 103 35.0
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 4.9e-08 62.8 121 33.1
A09p46330 Brassica napus HOM05D006628 ORTHO05D000088 6.4e-08 62.4 244 25.8
FAN24G1928 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.4e-08 62.4 85 42.4
CiPaw.05G236600 Carya illinoinensis HOM05D000395 ORTHO05D000088 8.3e-08 62.0 290 27.2
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 8.3e-08 62.0 97 34.0
MSTRG.20125 Avicennia marina HOM05D000823 ORTHO05D000088 1.1e-07 61.6 242 23.1
C06p21150 Brassica napus HOM05D006628 ORTHO05D000088 1.1e-07 61.6 275 22.9
BraA09t40098Z Brassica rapa HOM05D006628 ORTHO05D000088 1.1e-07 61.6 250 25.2
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 1.1e-07 61.6 128 32.0
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 1.4e-07 61.2 106 31.1
FvH4_2g07240 Fragaria vesca HOM05D000823 ORTHO05D009132 1.4e-07 61.2 265 22.3
FAN24G2044 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.4e-07 61.2 237 24.9
RcHm_v2.0_Chr6g0259791 Rosa chinensis HOM05D000823 ORTHO05D000088 1.4e-07 61.2 111 34.2
HPP92_003368 Vanilla planifolia HOM05D000823 ORTHO05D000088 1.4e-07 61.2 94 37.2
TAR381G0288 Trochodendron aralioides HOM05D000395 ORTHO05D000088 1.9e-07 60.8 107 34.6
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-07 60.5 103 32.0
Sp5g09020 Schrenkiella parvula HOM05D006628 ORTHO05D000088 2.4e-07 60.5 128 29.7
ATR0923G004 Amborella trichopoda HOM05D000823 ORTHO05D000088 3.2e-07 60.1 106 34.0
FAN15G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.2e-07 60.1 133 30.8
Prupe.4G178300 Prunus persica HOM05D000823 ORTHO05D000088 3.2e-07 60.1 286 23.4
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 3.2e-07 60.1 247 27.1
CiPaw.06G020200 Carya illinoinensis HOM05D000395 ORTHO05D000088 4.1e-07 59.7 279 26.9
FAN24G1365 Fragaria x ananassa HOM05D000823 ORTHO05D009132 4.1e-07 59.7 265 22.3
MBI16_g47024_MAGBIO Magnolia biondii HOM05D000395 ORTHO05D000088 4.1e-07 59.7 101 34.7
Nn8g38649 Nelumbo nucifera HOM05D000888 ORTHO05D000740 4.1e-07 59.7 258 24.0
Prupe.7G064600 Prunus persica HOM05D000823 ORTHO05D000088 4.1e-07 59.7 268 24.6
RcHm_v2.0_Chr4g0425711 Rosa chinensis HOM05D000823 ORTHO05D000088 4.1e-07 59.7 269 20.8
ATR0626G172 Amborella trichopoda HOM05D000823 ORTHO05D000088 5.4e-07 59.3 105 33.3
BcaB03g12447 Brassica carinata HOM05D006628 ORTHO05D000088 5.4e-07 59.3 156 28.8
CARHR289330 Cardamine hirsuta HOM05D006628 ORTHO05D000088 5.4e-07 59.3 271 25.8
PSO675G7843 Papaver somniferum HOM05D000823 ORTHO05D000088 5.4e-07 59.3 102 34.3
Potri.007G035500 Populus trichocarpa HOM05D000823 ORTHO05D000088 5.4e-07 59.3 102 35.3
BcaB04g20080 Brassica carinata HOM05D000823 ORTHO05D000088 7.1e-07 58.9 112 35.7
CiPaw.01G027400 Carya illinoinensis HOM05D000823 ORTHO05D000088 7.1e-07 58.9 265 21.9
Ciclev10019558m.g Citrus clementina HOM05D005797 ORTHO05D006479 7.1e-07 58.9 108 33.3
Cc04_g10490 Coffea canephora HOM05D005797 ORTHO05D006479 7.1e-07 58.9 101 32.7
FvH4_7g33560 Fragaria vesca HOM05D000395 ORTHO05D000088 7.1e-07 58.9 103 33.0
FAN01G0085 Fragaria x ananassa HOM05D000395 ORTHO05D000088 7.1e-07 58.9 103 33.0
Rhsim10G0125600 Rhododendron simsii HOM05D000823 ORTHO05D000088 7.1e-07 58.9 102 32.4
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 7.1e-07 58.9 245 24.1
Zm00001eb168870 Zea mays HOM05D000823 ORTHO05D000088 7.1e-07 58.9 107 30.8
Atru.chr5.2832 Acer truncatum HOM05D000823 ORTHO05D000088 9.2e-07 58.5 100 35.0
BcaB01g00291 Brassica carinata HOM05D006628 ORTHO05D000088 9.2e-07 58.5 135 29.6
BolC6t37302H Brassica oleracea HOM05D006628 ORTHO05D000088 9.2e-07 58.5 261 22.6
Cc08_g06160 Coffea canephora HOM05D000888 ORTHO05D000740 9.2e-07 58.5 98 32.7
FAN10G1086 Fragaria x ananassa HOM05D000395 ORTHO05D000088 9.2e-07 58.5 103 33.0
Peaxi162Scf00016g01342 Petunia axillaris HOM05D000823 ORTHO05D000088 9.2e-07 58.5 100 33.0
vmacro02165 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 9.2e-07 58.5 123 33.3
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.2e-06 58.2 126 30.2
A07p21570 Brassica napus HOM05D006628 ORTHO05D000088 1.2e-06 58.2 259 23.2
C03p19330 Brassica napus HOM05D006628 ORTHO05D000088 1.2e-06 58.2 178 27.5
Thhalv10014972m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 1.2e-06 58.2 101 31.7
FAN12G2331 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.2e-06 58.2 251 22.3
Prupe.4G178200 Prunus persica HOM05D000823 ORTHO05D000088 1.2e-06 58.2 273 24.9
FAN10G3733 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.6e-06 57.8 103 33.0
Nn6g32134 Nelumbo nucifera HOM05D000823 ORTHO05D000088 1.6e-06 57.8 96 30.2
RcHm_v2.0_Chr6g0259781 Rosa chinensis HOM05D000823 ORTHO05D000088 1.6e-06 57.8 106 30.2
vmacro19474 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 1.6e-06 57.8 102 34.3
BcaB04g20081 Brassica carinata HOM05D000823 ORTHO05D000088 2.1e-06 57.4 116 36.2
Cpa.g.sc62.78 Carica papaya HOM05D000395 ORTHO05D000088 2.1e-06 57.4 96 35.4
FAN15G0813 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.1e-06 57.4 116 32.8
SEGI_34521 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.1e-06 57.4 102 34.3
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.1e-06 57.4 102 31.4
BcaC04g21471 Brassica carinata HOM05D000305 ORTHO05D000065 2.7e-06 57.0 114 29.8
C09p31400 Brassica napus HOM05D000305 ORTHO05D000065 2.7e-06 57.0 114 29.8
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 2.7e-06 57.0 155 29.7
Haze_08007 Corylus avellana HOM05D000823 ORTHO05D000088 3.5e-06 56.6 123 31.7
Haze_08013 Corylus avellana HOM05D000823 ORTHO05D000088 3.5e-06 56.6 123 31.7
Nn6g32053 Nelumbo nucifera HOM05D000823 ORTHO05D000088 3.5e-06 56.6 113 30.1
Nitab4.5_0003282g0040 Nicotiana tabacum HOM05D005797 ORTHO05D006479 3.5e-06 56.6 107 32.7
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 3.5e-06 56.6 127 30.7
HPP92_014045 Vanilla planifolia HOM05D000823 ORTHO05D000088 3.5e-06 56.6 122 34.4
A09p09600 Brassica napus HOM05D000823 ORTHO05D000088 4.6e-06 56.2 103 36.9
Nn6g34614 Nelumbo nucifera HOM05D000888 ORTHO05D000740 4.6e-06 56.2 135 31.1
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 6.0e-06 55.8 150 30.0
Migut.O00498 Erythranthe guttata HOM05D005797 ORTHO05D006479 6.0e-06 55.8 125 31.2
Thhalv10004496m.g Eutrema salsugineum HOM05D000823 ORTHO05D000088 6.0e-06 55.8 103 35.0
Nn6g32136 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.0e-06 55.8 127 28.3
SEGI_15671 Sequoiadendron giganteum HOM05D005797 ORTHO05D006479 6.0e-06 55.8 180 27.8
BcaB02g07792 Brassica carinata HOM05D006628 ORTHO05D000088 7.8e-06 55.5 258 22.9
CARHR280710 Cardamine hirsuta HOM05D000823 ORTHO05D000088 7.8e-06 55.5 105 33.3
Cfa004222 Carpinus fangiana HOM05D000823 ORTHO05D000088 7.8e-06 55.5 196 24.5
FvH4_4g19990 Fragaria vesca HOM05D000823 ORTHO05D009132 7.8e-06 55.5 253 22.1
Gohir.A07G034736 Gossypium hirsutum HOM05D000888 ORTHO05D000740 7.8e-06 55.5 254 23.6
RcHm_v2.0_Chr2g0103551 Rosa chinensis HOM05D000395 ORTHO05D000088 7.8e-06 55.5 127 32.3


User provided reference genes

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