Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 3.1e-102 375.2 192 100.0
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.5e-101 372.9 192 99.5
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.2e-95 353.2 194 92.3
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 2.4e-94 349.0 194 92.8
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 9.0e-86 320.5 167 98.2
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 2.6e-85 318.9 193 87.6
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.3e-47 193.7 201 60.2
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 1.2e-45 187.2 207 57.0
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 5.9e-45 184.9 208 55.8
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 7.7e-45 184.5 197 56.3
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.4e-43 180.3 204 55.9
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 2.5e-43 179.5 201 56.2
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 3.2e-43 179.1 204 57.4
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 3.6e-42 175.6 201 57.2
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 4.4e-40 168.7 224 50.4
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 5.7e-40 168.3 198 57.6
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 7.4e-40 167.9 188 55.3
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.5e-37 159.1 209 51.2
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 1.1e-35 154.1 227 47.6
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.5e-35 153.7 191 52.9
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 7.2e-35 151.4 210 49.0
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 2.1e-34 149.8 196 56.1
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 2.3e-33 146.4 190 51.1
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 3.0e-33 146.0 191 49.7
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 5.2e-33 145.2 220 49.1
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 5.2e-33 145.2 204 51.0
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 6.7e-33 144.8 205 48.8
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 8.8e-33 144.4 220 46.8
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 8.8e-33 144.4 197 50.3
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 5.7e-32 141.7 202 51.5
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 7.5e-32 141.4 190 50.0
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 9.7e-32 141.0 203 46.3
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 9.7e-32 141.0 199 50.8
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 2.2e-31 139.8 205 55.1
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 2.2e-31 139.8 190 47.4
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 4.8e-31 138.7 197 47.7
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 6.3e-31 138.3 212 52.8
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 6.3e-31 138.3 194 49.5
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 8.2e-31 137.9 194 49.5
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 1.1e-30 137.5 202 49.5
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 1.4e-30 137.1 201 50.2
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 2.4e-30 136.3 202 50.0
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 4.1e-30 135.6 217 44.7
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.2e-29 134.0 217 44.7
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.6e-29 133.7 189 48.1
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 5.9e-29 131.7 213 44.1
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.2e-28 129.8 215 45.1
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 2.9e-28 129.4 206 47.6
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.1e-27 127.5 213 45.5
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 1.9e-27 126.7 188 52.1
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 9.4e-27 124.4 187 47.1
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 1.6e-26 123.6 184 52.2
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 6.1e-26 121.7 195 51.8
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.0e-25 120.9 238 39.1
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 1.4e-25 120.6 188 46.3
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 6.8e-25 118.2 197 45.7
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.2e-24 117.5 191 51.8
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 1.5e-24 117.1 167 52.7
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 4.4e-24 115.5 218 44.5
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 5.7e-24 115.2 192 46.9
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.3e-23 114.0 193 46.1
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 2.8e-23 112.8 192 45.8
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.1e-22 110.9 194 41.2
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.6e-21 107.1 164 43.3
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 5.9e-21 105.1 219 39.3
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 5.9e-21 105.1 192 43.2
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.1e-19 100.9 233 36.1
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.9e-19 100.1 193 42.5
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 2.5e-19 99.8 238 35.7
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 3.3e-19 99.4 250 36.0
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.2e-18 97.4 199 40.7
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 1.6e-18 97.1 242 33.9
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.6e-18 97.1 179 44.7
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 4.7e-18 95.5 241 34.4
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 6.1e-18 95.1 251 35.9
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 6.1e-18 95.1 168 44.0
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 1.0e-17 94.4 194 38.1
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 3.0e-17 92.8 235 34.0
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 4.0e-17 92.4 241 34.4
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 8.9e-17 91.3 237 33.8
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 1.2e-16 90.9 237 33.8
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 1.5e-16 90.5 197 43.7
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.0e-16 90.1 237 33.8
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 5.7e-16 88.6 241 33.2
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 2.2e-15 86.7 234 32.9
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 3.7e-15 85.9 121 49.6
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 6.3e-15 85.1 218 34.9
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 6.3e-15 85.1 218 34.9
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 4.1e-14 82.4 197 39.1
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 5.4e-14 82.0 232 31.9
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 9.2e-14 81.3 236 36.4
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 4.5e-13 79.0 203 33.5
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 3.3e-11 72.8 227 30.4
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 7.3e-11 71.6 170 37.6
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 8.0e-10 68.2 153 35.3
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 5.2e-09 65.5 127 37.8
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 5.2e-09 65.5 127 37.8
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 6.4e-07 58.5 175 31.4
PGSC0003DMG401029181 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.4e-06 57.4 79 53.2
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 4.1e-06 55.8 157 33.1
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 5.4e-06 55.5 231 30.7
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 9.2e-06 54.7 207 30.9


User provided reference genes

Program Settings