Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 9.7e-170 600.1 316 100.0
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 9.7e-170 600.1 316 100.0
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.3e-153 546.6 316 92.4
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 5.0e-150 534.6 314 89.5
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.4e-130 468.8 311 84.9
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 3.1e-128 462.2 323 76.2
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.2e-122 443.7 355 74.1
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 1.0e-115 420.6 323 71.8
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 6.6e-110 401.4 319 68.0
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 4.7e-108 395.2 320 67.2
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 6.2e-108 394.8 319 65.2
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 1.4e-107 393.7 319 66.5
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 1.8e-107 393.3 321 66.7
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 2.3e-107 392.9 316 67.4
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 2.3e-107 392.9 320 66.6
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 4.0e-107 392.1 324 65.7
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.6e-106 389.4 321 66.0
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 2.6e-106 389.4 318 66.7
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 3.4e-106 389.0 319 65.2
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 3.4e-106 389.0 319 65.8
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 3.4e-106 389.0 319 66.1
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 7.5e-106 387.9 320 66.6
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 1.7e-105 386.7 321 65.4
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.9e-104 383.3 320 66.2
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 2.4e-104 382.9 320 64.7
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 5.4e-104 381.7 313 64.9
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 1.2e-103 380.6 320 65.6
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 1.2e-103 380.6 319 66.1
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 2.7e-103 379.4 311 65.9
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 6.0e-103 378.3 317 64.7
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 3.9e-102 375.6 317 64.0
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 6.6e-102 374.8 320 64.1
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 8.6e-102 374.4 320 64.7
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 8.6e-102 374.4 318 63.5
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 8.6e-102 374.4 325 63.7
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 1.9e-101 373.2 318 62.3
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 3.3e-101 372.5 319 63.3
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.3e-101 372.5 320 64.4
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 9.5e-101 370.9 335 63.0
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 1.6e-100 370.2 308 63.6
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 2.8e-100 369.4 319 63.0
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.6e-100 369.0 320 64.1
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 8.1e-100 367.9 310 65.2
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 8.1e-100 367.9 315 62.9
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 1.1e-99 367.5 316 61.7
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.4e-99 367.1 320 64.7
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 1.8e-99 366.7 369 57.5
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 6.8e-99 364.8 312 62.2
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 8.9e-99 364.4 320 61.2
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 1.5e-98 363.6 308 65.3
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 2.0e-98 363.2 318 61.9
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 2.6e-98 362.8 318 62.3
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 3.4e-98 362.5 319 63.6
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 5.8e-98 361.7 321 61.7
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 1.3e-97 360.5 326 60.7
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 4.9e-97 358.6 328 58.8
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 8.3e-97 357.8 313 61.7
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 1.9e-96 356.7 318 61.3
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 2.4e-96 356.3 314 62.7
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 2.7e-95 352.8 323 61.0
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 2.3e-94 349.7 313 62.6
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 2.3e-94 349.7 377 53.8
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.1e-93 347.4 303 62.4
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 4.3e-93 345.5 369 54.5
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 5.6e-93 345.1 359 56.3
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 7.3e-93 344.7 333 58.3
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 2.8e-92 342.8 315 58.4
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 6.2e-92 341.7 323 59.1
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 6.2e-92 341.7 319 60.8
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 1.1e-91 340.9 316 61.4
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 5.8e-90 335.1 318 60.7
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 1.3e-89 334.0 319 57.7
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 1.7e-89 333.6 318 57.9
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 2.2e-89 333.2 310 59.0
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 6.4e-89 331.6 298 62.8
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 8.4e-89 331.3 318 56.3
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 1.4e-88 330.5 316 57.3
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 3.2e-88 329.3 315 58.4
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 1.2e-87 327.4 314 56.4
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 1.2e-87 327.4 314 59.2
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 2.1e-87 326.6 302 60.3
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 2.1e-87 326.6 315 58.4
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 2.7e-87 326.2 315 59.0
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.3e-86 323.9 318 57.9
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 2.3e-86 323.2 339 56.3
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 2.5e-85 319.7 318 56.0
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 3.3e-85 319.3 319 58.3
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 4.3e-85 318.9 315 57.5
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 9.6e-85 317.8 321 56.4
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.3e-84 317.4 319 57.7
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.6e-84 317.0 335 52.8
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 2.8e-84 316.2 320 56.2
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 2.8e-84 316.2 320 56.2
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 1.1e-83 314.3 317 54.6
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 3.1e-83 312.8 315 55.9
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 4.0e-83 312.4 315 55.6
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 1.2e-82 310.8 318 55.0
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 1.2e-82 310.8 318 55.0
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 1.2e-82 310.8 318 55.0
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 5.8e-82 308.5 266 62.4
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 3.8e-81 305.8 311 57.2
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 7.8e-79 298.1 306 54.9
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.3e-78 297.4 269 67.3
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 1.3e-78 297.4 327 55.4
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 2.3e-78 296.6 318 54.4
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 3.0e-78 296.2 311 55.9
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 1.9e-77 293.5 256 64.1
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 3.6e-76 289.3 300 56.0
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 3.6e-76 289.3 308 54.2
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 4.5e-74 282.3 203 73.9
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.2e-71 274.2 265 57.4
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 4.6e-63 245.7 301 47.8
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 3.0e-62 243.0 318 48.4
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 1.5e-61 240.7 310 47.7
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.9e-61 240.4 313 49.8
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 8.2e-60 235.0 273 48.7
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 2.6e-58 229.9 310 46.5
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 1.4e-48 197.6 320 40.6
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 9.1e-43 178.3 330 37.9
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 6.5e-41 172.2 110 81.8
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 1.4e-40 171.0 110 80.0
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 3.2e-40 169.9 128 75.8
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 1.3e-36 157.9 176 52.8
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 1.7e-36 157.5 185 44.9
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.7e-36 157.5 102 78.4
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 1.2e-34 151.4 136 63.2
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 8.5e-33 145.2 190 48.9
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 4.8e-28 129.4 242 38.8
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 1.7e-25 120.9 96 66.7
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 1.8e-19 100.9 343 29.4
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 1.4e-14 84.7 107 46.7
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 5.2e-14 82.8 46 91.3
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 8.8e-14 82.0 49 85.7
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 8.8e-14 82.0 54 74.1
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 1.5e-13 81.3 67 62.7
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 2.0e-13 80.9 80 58.8
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 7.5e-13 79.0 45 88.9
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 1.7e-12 77.8 93 46.2
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 1.4e-11 74.7 53 69.8
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.1e-08 65.1 94 41.5
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 3.3e-08 63.5 76 40.8
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 4.2e-08 63.2 46 73.9
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 2.1e-07 60.8 36 77.8


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