Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 7.4e-186 653.7 318 100.0
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.2e-185 652.1 318 99.7
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 6.9e-184 647.1 318 99.1
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.0e-179 631.7 331 94.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.9e-172 607.1 313 95.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 3.3e-170 601.7 320 92.2
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.0e-150 537.0 319 82.4
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 4.7e-148 528.1 320 79.4
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 5.7e-146 521.2 319 80.3
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 2.8e-140 502.3 320 76.9
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 3.6e-140 501.9 318 77.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.9e-133 479.6 319 71.8
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 2.5e-133 479.2 318 72.3
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 4.3e-133 478.4 319 74.3
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.8e-131 473.0 315 73.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 6.8e-131 471.1 355 65.9
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 6.4e-129 464.5 318 70.8
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 6.6e-126 454.5 361 64.0
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.9e-120 436.4 317 66.6
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 3.2e-120 435.6 294 69.7
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 5.4e-120 434.9 317 69.4
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.6e-119 433.3 355 63.1
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.5e-119 432.2 255 78.4
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 4.6e-119 431.8 315 66.3
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.3e-117 425.6 325 65.2
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.1e-116 422.9 325 64.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.7e-116 421.8 319 64.9
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.1e-115 420.6 313 68.1
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.4e-115 420.2 309 66.0
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.8e-114 414.8 316 64.2
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 1.7e-113 413.3 325 64.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.8e-113 412.1 288 69.1
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 6.4e-113 411.4 288 69.1
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 8.4e-113 411.0 288 68.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 2.4e-112 409.5 288 68.1
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 1.9e-109 399.8 282 67.0
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 3.4e-106 389.0 318 59.7
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 7.6e-106 387.9 327 61.8
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.9e-104 383.3 294 64.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.9e-104 383.3 283 64.7
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.0e-103 378.3 298 64.1
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 6.0e-103 378.3 292 61.0
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.3e-102 377.1 267 69.7
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 1.7e-102 376.7 324 57.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.1e-101 374.0 311 60.5
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 9.6e-101 370.9 283 62.9
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.6e-100 370.2 321 57.9
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 4.0e-99 365.5 237 72.6
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 9.0e-99 364.4 283 60.4
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 9.0e-99 364.4 311 58.5
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.2e-98 364.0 311 59.5
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.5e-98 363.6 311 57.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.5e-98 363.6 320 55.6
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 9.9e-98 360.9 311 58.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.3e-97 360.5 293 59.7
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.7e-97 360.1 285 61.1
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 6.4e-97 358.2 288 60.4
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.1e-96 357.5 299 58.5
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 1.4e-96 357.1 310 57.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.9e-96 356.7 284 60.6
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 3.2e-96 355.9 312 56.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 5.4e-96 355.1 294 60.2
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 7.1e-96 354.8 289 59.9
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.6e-95 353.6 311 57.9
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.6e-95 353.6 306 57.2
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.6e-95 353.6 276 60.9
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 4.6e-95 352.1 310 57.1
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.0e-94 350.9 257 65.0
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.3e-94 350.5 323 54.8
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.3e-94 349.7 313 57.5
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 5.1e-94 348.6 322 54.7
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 5.1e-94 348.6 364 50.8
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.1e-93 347.4 255 61.2
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.5e-93 347.1 312 56.1
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 7.4e-93 344.7 302 56.3
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 2.1e-92 343.2 283 58.3
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 8.1e-92 341.3 321 54.2
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 8.1e-92 341.3 321 54.2
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.2e-90 337.4 332 51.5
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 2.0e-90 336.7 235 67.2
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.4e-90 335.9 321 54.2
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 3.4e-90 335.9 259 62.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 2.2e-89 333.2 210 73.8
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.2e-88 329.3 325 55.1
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 2.1e-87 326.6 294 54.1
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 2.7e-87 326.2 311 53.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.8e-86 323.6 301 54.2
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.5e-85 320.5 271 58.7
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.5e-85 320.5 271 58.7
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 3.7e-84 315.8 256 58.2
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 5.3e-83 312.0 258 57.4
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.6e-82 309.7 272 58.1
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.7e-73 280.4 292 46.9
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.6e-71 273.9 268 53.7
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.0e-70 271.2 232 58.6
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.8e-70 270.4 289 47.4
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 5.7e-53 212.2 156 67.3
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-43 181.4 132 62.1
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.2e-42 177.9 301 38.2
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.5e-42 176.4 140 60.0
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.2e-39 167.9 125 61.6
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 3.5e-34 149.8 236 36.4
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 4.5e-34 149.4 124 56.5
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.8e-30 137.5 255 35.3
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.0e-26 124.0 116 50.0
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 2.9e-25 120.2 90 62.2
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 2.9e-25 120.2 90 62.2
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 6.8e-22 109.0 141 40.4
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.5e-21 107.8 86 58.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 3.1e-14 83.6 64 62.5
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 2.0e-13 80.9 55 67.3
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 7.5e-13 79.0 102 44.1
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-11 74.3 53 64.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 5.6e-08 62.8 213 25.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 7.3e-08 62.4 179 28.5
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.2e-07 61.6 64 54.7
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 4.7e-07 59.7 102 32.4
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.1e-06 58.5 94 38.3
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-06 58.2 33 87.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.3e-06 57.4 201 25.9


User provided reference genes

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