Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.4e-48 195.3 105 100.0
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.6e-44 182.6 105 94.3
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 3.0e-43 178.3 104 93.3
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.0e-43 178.3 104 93.3
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 8.8e-43 176.8 104 92.3
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.3e-42 174.5 101 93.1
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.7e-42 174.1 104 91.3
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.5e-39 166.0 105 83.8
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 5.0e-38 161.0 104 81.7
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 7.2e-37 157.1 104 80.8
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 9.4e-37 156.8 101 82.2
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.2e-36 156.4 104 79.8
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.2e-36 156.4 100 80.0
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.6e-36 156.0 104 78.8
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.6e-36 156.0 100 81.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 2.1e-36 155.6 101 80.2
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 2.1e-36 155.6 100 81.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 2.7e-36 155.2 105 77.1
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 2.7e-36 155.2 100 83.0
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.7e-36 155.2 104 79.8
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 6.1e-36 154.1 101 80.2
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 7.9e-36 153.7 104 78.8
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.0e-35 153.3 100 81.0
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.4e-35 152.9 102 80.4
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 3.0e-35 151.8 104 76.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 3.0e-35 151.8 101 79.2
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 3.0e-35 151.8 104 76.9
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.0e-35 151.8 100 79.0
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 3.9e-35 151.4 104 76.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.1e-35 151.0 105 77.1
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 6.7e-35 150.6 101 78.2
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.1e-34 149.8 102 77.5
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.1e-34 149.8 100 79.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.1e-34 149.8 104 76.0
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.1e-34 149.8 104 76.0
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.5e-34 149.4 100 78.0
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.0e-34 149.1 101 75.2
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 104 74.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 2.0e-34 149.1 101 77.2
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.0e-34 149.1 104 74.0
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 2.6e-34 148.7 104 73.1
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 2.6e-34 148.7 100 79.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 5.7e-34 147.5 104 73.1
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 7.4e-34 147.1 101 76.2
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 9.7e-34 146.7 101 76.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.3e-33 146.4 100 77.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.3e-33 146.4 99 77.8
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.7e-33 146.0 102 74.5
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.7e-33 146.0 104 75.0
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 2.2e-33 145.6 101 76.2
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 2.8e-33 145.2 101 75.2
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 6.3e-33 144.1 105 74.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 6.3e-33 144.1 102 72.5
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 8.2e-33 143.7 103 74.8
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.4e-32 142.9 100 75.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 72.8
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 72.8
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 72.8
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.8e-32 142.5 103 72.8
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 2.4e-32 142.1 101 72.3
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 3.1e-32 141.7 101 73.3
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 3.1e-32 141.7 100 75.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 4.1e-32 141.4 100 74.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 4.1e-32 141.4 103 72.8
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 4.1e-32 141.4 100 73.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 4.1e-32 141.4 100 75.0
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 4.1e-32 141.4 100 75.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 4.1e-32 141.4 105 73.3
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 4.1e-32 141.4 94 77.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 4.1e-32 141.4 103 71.8
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 5.3e-32 141.0 101 75.2
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 7.0e-32 140.6 105 71.4
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 7.0e-32 140.6 100 74.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 7.0e-32 140.6 100 74.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 9.1e-32 140.2 103 71.8
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 9.1e-32 140.2 100 74.0
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 9.1e-32 140.2 101 71.3
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.0e-31 139.0 103 69.9
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 2.0e-31 139.0 103 71.8
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.6e-31 138.7 101 72.3
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 3.5e-31 138.3 103 70.9
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 5.9e-31 137.5 105 70.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 5.9e-31 137.5 105 71.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.7e-31 137.1 101 71.3
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.0e-30 136.7 105 70.5
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 2.2e-30 135.6 105 67.6
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.9e-30 135.2 116 67.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 8.5e-30 133.7 103 68.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 69.3
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 68.0
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 2.5e-29 132.1 101 71.3
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 5.5e-29 131.0 105 66.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 2.7e-28 128.6 98 67.3
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 3.6e-28 128.3 101 65.3
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 4.7e-28 127.9 101 69.3
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 4.7e-28 127.9 101 66.3
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 8.0e-28 127.1 105 64.8
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 8.0e-28 127.1 105 64.8
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 4.4e-26 121.3 77 85.7
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 4.8e-25 117.9 80 80.0
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 6.3e-25 117.5 153 51.0
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.4e-24 116.3 95 67.4
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.4e-24 116.3 80 76.2
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.8e-24 115.9 100 66.0
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 5.3e-24 114.4 80 77.5
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 9.1e-24 113.6 80 75.0
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 9.1e-24 113.6 82 74.4
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.0e-23 112.5 82 74.4
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.7e-23 112.1 84 71.4
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 4.5e-23 111.3 103 58.3
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 7.7e-23 110.5 102 54.9
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 5.0e-22 107.8 103 57.3
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.2e-20 103.2 80 68.8
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 6.1e-20 100.9 79 68.4
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.4e-19 99.8 174 39.1
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 3.0e-19 98.6 74 68.9
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 4.0e-19 98.2 98 53.1
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.5e-18 96.3 78 65.4
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.3e-17 93.2 76 67.1
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 1.7e-17 92.8 102 50.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 3.7e-17 91.7 54 88.9
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.2e-15 86.7 100 49.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 1.6e-12 76.3 52 69.2
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 1.6e-12 76.3 52 69.2
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.7e-09 66.2 94 39.4
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 4.1e-08 61.6 86 38.4
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.0e-07 59.3 50 56.0
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 7.7e-07 57.4 77 46.8
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 2.3e-06 55.8 92 35.9


User provided reference genes

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