Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 2.9e-171 605.1 302 100.0
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.1e-168 594.3 298 99.3
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.8e-166 588.6 302 97.4
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 7.1e-146 520.8 271 97.8
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 1.2e-140 503.4 312 76.6
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 1.5e-127 459.9 337 64.4
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 1.4e-125 453.4 331 68.3
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 1.2e-124 450.3 326 66.0
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 1.6e-121 439.9 316 64.9
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 2.1e-121 439.5 321 64.2
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 7.9e-121 437.6 321 65.1
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 1.8e-120 436.4 319 64.9
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 2.3e-120 436.0 331 61.0
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 6.7e-120 434.5 325 62.5
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 6.7e-120 434.5 342 59.9
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 4.3e-119 431.8 323 63.8
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 1.3e-118 430.3 326 62.9
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 6.3e-118 427.9 315 65.4
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 8.2e-118 427.6 321 63.9
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 8.2e-118 427.6 339 61.1
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 1.4e-117 426.8 334 61.7
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 2.4e-117 426.0 311 63.7
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 2.4e-117 426.0 326 62.6
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 3.1e-117 425.6 323 62.5
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 5.3e-117 424.9 322 62.4
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 9.1e-117 424.1 342 62.0
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 4.5e-116 421.8 323 62.5
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 1.3e-115 420.2 323 62.8
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 1.3e-115 420.2 326 61.3
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 3.8e-115 418.7 317 61.5
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 3.8e-115 418.7 333 59.5
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 1.4e-114 416.8 323 62.5
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 1.4e-114 416.8 333 58.9
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 1.9e-114 416.4 335 58.8
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 2.5e-114 416.0 323 62.5
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 3.2e-114 415.6 330 60.0
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 4.2e-114 415.2 323 61.0
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 4.7e-113 411.8 323 60.4
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.4e-112 410.2 318 60.7
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 1.8e-112 409.8 327 60.6
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 2.3e-112 409.5 303 63.4
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 2.0e-111 406.4 332 59.6
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 1.3e-110 403.7 323 58.5
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 2.8e-110 402.5 319 59.9
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 2.8e-110 402.5 326 59.8
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 2.8e-110 402.5 320 60.6
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 4.8e-110 401.7 323 59.4
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 8.2e-110 401.0 303 63.4
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 8.2e-110 401.0 330 59.1
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 1.1e-109 400.6 323 58.2
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 1.8e-109 399.8 331 58.6
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 2.4e-109 399.4 320 58.8
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 2.4e-109 399.4 321 59.2
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 4.1e-109 398.7 312 60.6
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 5.3e-109 398.3 330 57.6
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 7.0e-109 397.9 314 66.2
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 7.0e-109 397.9 329 58.4
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 9.1e-109 397.5 335 57.3
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 1.5e-108 396.7 322 58.4
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 2.6e-108 396.0 323 58.8
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 2.6e-108 396.0 320 60.0
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 3.5e-108 395.6 329 60.8
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 3.5e-108 395.6 320 59.7
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 4.5e-108 395.2 320 62.2
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 7.7e-108 394.4 338 57.1
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.0e-107 394.0 324 59.0
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 1.7e-107 393.3 323 58.8
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 5.0e-107 391.7 325 60.0
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 1.1e-106 390.6 324 59.3
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 2.5e-106 389.4 319 58.3
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 3.2e-106 389.0 329 57.1
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 4.2e-106 388.7 323 57.6
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 1.6e-105 386.7 334 56.0
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 2.1e-105 386.3 327 56.9
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 1.0e-104 384.0 335 56.1
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 5.2e-104 381.7 310 61.3
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 4.4e-103 378.6 353 54.4
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 4.4e-103 378.6 317 63.7
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 5.7e-103 378.3 321 61.7
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 7.4e-103 377.9 356 53.7
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 2.8e-102 375.9 319 57.4
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 3.7e-102 375.6 327 58.7
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 8.2e-102 374.4 352 53.4
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 1.0e-99 367.5 314 57.0
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 1.0e-99 367.5 334 54.2
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 5.0e-99 365.2 303 59.1
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 6.5e-99 364.8 333 54.4
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 5.7e-95 351.7 381 52.5
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 7.5e-95 351.3 397 50.4
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.3e-94 350.5 428 44.2
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 2.2e-94 349.7 309 57.0
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 3.7e-94 349.0 388 47.9
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 3.7e-94 349.0 322 59.3
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 6.3e-94 348.2 309 54.7
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 1.8e-93 346.7 397 50.4
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 7.7e-92 341.3 289 56.7
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 2.9e-91 339.3 405 45.7
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 2.5e-90 336.3 318 56.3
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 2.5e-90 336.3 318 56.3
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 4.0e-88 328.9 312 50.6
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 3.4e-87 325.9 313 50.5
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 7.5e-87 324.7 311 50.8
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 1.3e-86 323.9 266 58.6
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 6.3e-86 321.6 320 49.4
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 1.8e-85 320.1 265 58.9
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 2.4e-85 319.7 313 50.8
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 1.2e-81 307.4 279 54.8
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 1.0e-80 304.3 252 59.5
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 5.7e-79 298.5 304 49.0
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 6.4e-78 295.0 324 54.3
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 6.4e-78 295.0 299 48.5
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 1.2e-76 290.8 302 46.7
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 2.7e-76 289.7 301 47.8
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 2.9e-75 286.2 351 45.0
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 1.1e-74 284.3 173 75.1
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.1e-74 284.3 302 47.7
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 2.1e-73 280.0 258 55.0
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 4.4e-71 272.3 427 36.1
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 1.3e-70 270.8 392 37.5
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 4.1e-69 265.8 486 33.1
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 7.0e-69 265.0 365 40.5
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 6.2e-65 251.9 316 40.5
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 1.8e-64 250.4 310 44.2
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 7.5e-63 245.0 307 43.3
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 2.2e-62 243.4 419 35.3
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 2.3e-56 223.4 306 37.6
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 5.1e-51 205.7 218 51.8
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 8.9e-48 194.9 413 30.3
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 4.9e-46 189.1 207 49.3
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 1.6e-41 174.1 98 74.5
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 1.8e-40 170.6 162 50.0
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 1.8e-24 117.5 230 34.3
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 2.6e-23 113.6 161 39.8
unitig_0.g662 Utricularia gibba HOM05D005645 ORTHO05D007156 2.6e-23 113.6 104 49.0
MD05G1102200 Malus domestica HOM05D005645 ORTHO05D007156 3.9e-19 99.8 117 42.7
FAN15G0862 Fragaria x ananassa HOM05D005645 ORTHO05D046604 1.6e-17 94.4 48 85.4
FAN07G2129 Fragaria x ananassa HOM05D005645 ORTHO05D046604 1.0e-11 75.1 80 48.8
SMO356G0542 Selaginella moellendorffii HOM05D002394 ORTHO05D002508 7.4e-10 68.9 121 33.1
FAN28G1940 Fragaria x ananassa HOM05D000899 ORTHO05D000710 2.2e-09 67.4 78 66.7
FvH4_1g15051 Fragaria vesca HOM05D000899 ORTHO05D197287 4.1e-08 63.2 75 68.0
DCAR_025410 Daucus carota HOM05D002394 ORTHO05D002508 1.5e-07 61.2 123 34.1
Sc10g0003270 Simmondsia chinensis HOM05D002394 ORTHO05D002508 1.5e-07 61.2 123 34.1
arahy.Tifrunner.gnm1.ann1.56XWA4 Arachis hypogaea HOM05D002394 ORTHO05D002508 7.7e-07 58.9 123 35.8
Hma1.2p1_3742F.1_g337440 Hydrangea macrophylla HOM05D002394 ORTHO05D002508 1.0e-06 58.5 123 36.6
arahy.Tifrunner.gnm1.ann1.GVJS70 Arachis hypogaea HOM05D002394 ORTHO05D002508 1.3e-06 58.2 123 33.3
Eucgr.H01519 Eucalyptus grandis HOM05D002394 ORTHO05D002508 1.3e-06 58.2 168 29.8
ATR0064G118 Amborella trichopoda HOM05D002394 ORTHO05D002508 1.7e-06 57.8 123 33.3
SEGI_33966 Sequoiadendron giganteum HOM05D002394 ORTHO05D002508 1.7e-06 57.8 124 34.7
Hma1.2p1_0221F.1_g093090 Hydrangea macrophylla HOM05D002394 ORTHO05D002508 2.9e-06 57.0 119 37.0
Rhsim08G0073700 Rhododendron simsii HOM05D002394 ORTHO05D002508 2.9e-06 57.0 124 35.5
Hma1.2p1_1741F.1_g300110 Hydrangea macrophylla HOM05D002394 ORTHO05D002508 3.8e-06 56.6 123 35.8
Duzib147G0526 Durio zibethinus HOM05D002394 ORTHO05D002508 5.0e-06 56.2 123 34.1
Duzib264G0540 Durio zibethinus HOM05D002394 ORTHO05D002508 5.0e-06 56.2 123 33.3
Lsat_1_v5_gn_4_170261 Lactuca sativa HOM05D002394 ORTHO05D002508 5.0e-06 56.2 123 33.3
Ca_04870_v3 Cicer arietinum L. HOM05D002394 ORTHO05D002508 6.5e-06 55.8 305 22.3
TPR.G26203 Trifolium pratense HOM05D002394 ORTHO05D002508 6.5e-06 55.8 305 22.0


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