Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g21831 Fragaria vesca HOM05D000118 ORTHO05D035621 1.4e-133 479.6 229 100.0
FAN15G3615 Fragaria x ananassa HOM05D000118 ORTHO05D035621 7.2e-74 281.2 148 90.5
FAN20G2915 Fragaria x ananassa HOM05D000118 ORTHO05D035621 1.8e-56 223.4 126 83.3
Prupe.8G226500 Prunus persica HOM05D000118 ORTHO05D000098 3.1e-16 89.7 236 30.5
Prupe.8G226700 Prunus persica HOM05D000118 ORTHO05D000098 6.8e-16 88.6 236 30.5
RcHm_v2.0_Chr6g0288661 Rosa chinensis HOM05D000118 ORTHO05D000098 1.7e-14 84.0 225 27.6
RcHm_v2.0_Chr6g0288761 Rosa chinensis HOM05D000118 ORTHO05D000098 6.4e-14 82.0 225 28.4
GSVIVG01028299001 Vitis vinifera HOM05D000118 ORTHO05D000098 8.4e-14 81.6 231 28.6
RcHm_v2.0_Chr6g0310751 Rosa chinensis HOM05D000118 ORTHO05D000098 1.9e-13 80.5 237 27.0
Dinv34606 Davidia involucrata HOM05D000118 ORTHO05D000098 7.1e-13 78.6 226 29.2
FvH4_2g21880 Fragaria vesca HOM05D000118 ORTHO05D000098 4.6e-12 75.9 232 26.3
Prupe.8G226800 Prunus persica HOM05D000118 ORTHO05D000098 4.6e-12 75.9 229 23.6
Dinv34603 Davidia involucrata HOM05D000118 ORTHO05D000098 7.8e-12 75.1 214 27.1
MD10G1187000 Malus domestica HOM05D000118 ORTHO05D000098 7.8e-12 75.1 228 25.0
Duzib187G0837 Durio zibethinus HOM05D000118 ORTHO05D000098 1.0e-11 74.7 233 28.3
Duzib187G1919 Durio zibethinus HOM05D000118 ORTHO05D000098 3.9e-11 72.8 233 28.3
Duzib187G1259 Durio zibethinus HOM05D000118 ORTHO05D000098 6.6e-11 72.0 233 28.3
RcHm_v2.0_Chr6g0288701 Rosa chinensis HOM05D000118 ORTHO05D000098 8.7e-11 71.6 77 54.5
Dinv24383 Davidia involucrata HOM05D000118 ORTHO05D000098 1.5e-10 70.9 225 28.4
Dinv24380 Davidia involucrata HOM05D000118 ORTHO05D000098 1.9e-10 70.5 210 28.1
Oeu061430.1 Olea europaea HOM05D000118 ORTHO05D000098 1.9e-10 70.5 230 25.2
RcHm_v2.0_Chr6g0288671 Rosa chinensis HOM05D000118 ORTHO05D050722 2.5e-10 70.1 44 72.7
Cfa002403 Carpinus fangiana HOM05D000118 ORTHO05D000098 4.3e-10 69.3 229 27.5
Dinv34604 Davidia involucrata HOM05D000118 ORTHO05D000098 4.3e-10 69.3 214 27.1
Dinv24382 Davidia involucrata HOM05D000118 ORTHO05D000098 5.6e-10 68.9 210 28.1
Oeu061429.1 Olea europaea HOM05D000118 ORTHO05D000098 7.3e-10 68.6 230 25.7
Oeu061432.1 Olea europaea HOM05D000118 ORTHO05D000098 7.3e-10 68.6 230 25.7
Hma1.2p1_0747F.1_g212460 Hydrangea macrophylla HOM05D000118 ORTHO05D000098 9.6e-10 68.2 227 26.9
QL09p038073 Quercus lobata HOM05D000118 ORTHO05D000098 1.3e-09 67.8 230 25.7
Haze_24599 Corylus avellana HOM05D000118 ORTHO05D000098 1.6e-09 67.4 229 26.6
FAN27G3225 Fragaria x ananassa HOM05D000118 ORTHO05D000098 1.6e-09 67.4 234 28.6
MD05G1200300 Malus domestica HOM05D000118 ORTHO05D000098 2.1e-09 67.0 228 23.7
Nn3g18345 Nelumbo nucifera HOM05D000118 ORTHO05D000098 4.8e-09 65.9 163 28.2
Sabra17G0111400 Salix brachista HOM05D000118 ORTHO05D000098 6.2e-09 65.5 213 24.9
vmacro02649 Vaccinium macrocarpon HOM05D000118 ORTHO05D000098 6.2e-09 65.5 225 24.4
Sabra17G0114400 Salix brachista HOM05D000118 ORTHO05D000098 8.1e-09 65.1 213 24.9
ECA247G0407 Erigeron canadensis HOM05D000118 ORTHO05D000098 1.1e-08 64.7 150 31.3
FvH4_2g21910 Fragaria vesca HOM05D000118 ORTHO05D000098 1.1e-08 64.7 223 26.5
FAN24G0992 Fragaria x ananassa HOM05D000118 ORTHO05D000098 1.1e-08 64.7 223 26.5
RcHm_v2.0_Chr6g0288791 Rosa chinensis HOM05D000118 ORTHO05D000098 1.1e-08 64.7 221 26.2
FAN20G2093 Fragaria x ananassa HOM05D000118 ORTHO05D000098 1.4e-08 64.3 234 28.2
Gorai.001G251800 Gossypium raimondii HOM05D000118 ORTHO05D000098 1.4e-08 64.3 222 25.7
Lj4A588T34 Lonicera japonica HOM05D000118 ORTHO05D000098 1.4e-08 64.3 220 26.4
QL09p037971 Quercus lobata HOM05D000118 ORTHO05D000098 1.4e-08 64.3 228 23.2
FvH4_2g21890 Fragaria vesca HOM05D000118 ORTHO05D000098 1.8e-08 63.9 234 27.4
Potri.017G135800 Populus trichocarpa HOM05D000118 ORTHO05D000098 1.8e-08 63.9 213 24.9
Dinv22430 Davidia involucrata HOM05D000118 ORTHO05D000098 2.4e-08 63.5 234 24.4
Lj4A600T33 Lonicera japonica HOM05D000118 ORTHO05D000098 2.4e-08 63.5 220 25.9
RcHm_v2.0_Chr6g0288741 Rosa chinensis HOM05D000118 ORTHO05D000098 2.4e-08 63.5 152 31.6
Sed0016608 Sechium edule HOM05D000118 ORTHO05D000098 2.4e-08 63.5 219 25.6
Eucgr.K03274 Eucalyptus grandis HOM05D000118 ORTHO05D000098 3.1e-08 63.2 227 25.6
Potri.005G222300 Populus trichocarpa HOM05D000118 ORTHO05D000098 3.1e-08 63.2 226 27.9
Sabra05G0171000 Salix brachista HOM05D000118 ORTHO05D000098 3.1e-08 63.2 226 28.3
Duzib138G1751 Durio zibethinus HOM05D000118 ORTHO05D000098 4.0e-08 62.8 221 28.1
TWI75G1285 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 5.3e-08 62.4 212 25.5
MSTRG.18312 Avicennia marina HOM05D000118 ORTHO05D000098 6.9e-08 62.0 228 24.1
Migut.D00393 Erythranthe guttata HOM05D000118 ORTHO05D000098 6.9e-08 62.0 235 23.8
FAN20G1399 Fragaria x ananassa HOM05D000118 ORTHO05D000098 9.0e-08 61.6 223 25.6
Nitab4.5_0001044g0200 Nicotiana tabacum HOM05D000118 ORTHO05D000098 9.0e-08 61.6 240 24.2
SGA_v2.0_scaffold88G27266 Striga asiatica HOM05D000118 ORTHO05D000098 9.0e-08 61.6 225 26.7
Dinv22425 Davidia involucrata HOM05D000118 ORTHO05D000098 1.2e-07 61.2 234 23.1
Lj4A583T47 Lonicera japonica HOM05D000118 ORTHO05D000098 1.2e-07 61.2 219 26.9
Lj4A586T22 Lonicera japonica HOM05D000118 ORTHO05D000098 1.2e-07 61.2 219 26.9
TWI12G0469 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 1.2e-07 61.2 239 25.1
Nn3g19615 Nelumbo nucifera HOM05D000118 ORTHO05D000098 1.5e-07 60.8 233 26.6
Nn3g19616 Nelumbo nucifera HOM05D000118 ORTHO05D000098 1.5e-07 60.8 165 29.7
Migut.D00996 Erythranthe guttata HOM05D000118 ORTHO05D000098 2.0e-07 60.5 236 25.8
Migut.N00258 Erythranthe guttata HOM05D000118 ORTHO05D000098 2.0e-07 60.5 226 28.8
QL09p038021 Quercus lobata HOM05D000118 ORTHO05D000098 2.0e-07 60.5 230 23.0
Sed0005599 Sechium edule HOM05D000118 ORTHO05D000098 2.0e-07 60.5 215 26.5
Cpa.g.sc44.84 Carica papaya HOM05D000118 ORTHO05D000098 2.6e-07 60.1 155 31.6
Eucgr.K03272 Eucalyptus grandis HOM05D000118 ORTHO05D000098 2.6e-07 60.1 228 26.3
Gohir.D09G227148 Gossypium hirsutum HOM05D000118 ORTHO05D000098 2.6e-07 60.1 235 25.1
Lj9A640T59 Lonicera japonica HOM05D000118 ORTHO05D000098 2.6e-07 60.1 215 26.0
Peaxi162Scf01251g00014 Petunia axillaris HOM05D000118 ORTHO05D000098 2.6e-07 60.1 241 24.1
TWI12G0159 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 2.6e-07 60.1 233 27.0
Dinv09316 Davidia involucrata HOM05D000118 ORTHO05D000098 3.4e-07 59.7 233 25.8
Dinv22433 Davidia involucrata HOM05D000118 ORTHO05D000098 3.4e-07 59.7 234 23.1
Dinv22434 Davidia involucrata HOM05D000118 ORTHO05D000098 3.4e-07 59.7 233 24.0
Gorai.006G249400 Gossypium raimondii HOM05D000118 ORTHO05D000098 3.4e-07 59.7 235 25.1
Potri.002G040700 Populus trichocarpa HOM05D000118 ORTHO05D000098 4.4e-07 59.3 215 26.5
TPR.G3558 Trifolium pratense HOM05D000118 ORTHO05D000098 4.4e-07 59.3 230 24.8
TWI12G0512 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 4.4e-07 59.3 232 25.0
Actinidia12886 Actinidia chinensis HOM05D000118 ORTHO05D000098 5.8e-07 58.9 231 24.2
Eucgr.K03271 Eucalyptus grandis HOM05D000118 ORTHO05D000098 5.8e-07 58.9 232 23.7
Eucgr.K03273 Eucalyptus grandis HOM05D000118 ORTHO05D000098 5.8e-07 58.9 224 25.0
FAN15G1359 Fragaria x ananassa HOM05D000118 ORTHO05D000098 5.8e-07 58.9 158 28.5
Hma1.2p1_0747F.1_g212445 Hydrangea macrophylla HOM05D000118 ORTHO05D000098 5.8e-07 58.9 220 24.1
Hma1.2p1_0747F.1_g212450 Hydrangea macrophylla HOM05D000118 ORTHO05D000098 5.8e-07 58.9 220 24.1
Rhsim13G0033100 Rhododendron simsii HOM05D000118 ORTHO05D000098 5.8e-07 58.9 182 28.0
Dinv22431 Davidia involucrata HOM05D000118 ORTHO05D000098 7.6e-07 58.5 234 22.6
MBI18_g42388_MAGBIO Magnolia biondii HOM05D000118 ORTHO05D000098 7.6e-07 58.5 164 29.9
Sabra02G0032400 Salix brachista HOM05D000118 ORTHO05D000098 7.6e-07 58.5 215 25.6
Hund09591 Selenicereus undatus HOM05D000118 ORTHO05D000098 7.6e-07 58.5 216 25.9
Atru.chr4.2129 Acer truncatum HOM05D000118 ORTHO05D000098 9.9e-07 58.2 222 27.0
CSS0013094 Camellia sinensis var. sinensis HOM05D000118 ORTHO05D000098 9.9e-07 58.2 217 25.8
Eucgr.H03124 Eucalyptus grandis HOM05D000118 ORTHO05D000098 9.9e-07 58.2 153 31.4
Lj4A582T52 Lonicera japonica HOM05D000118 ORTHO05D000098 9.9e-07 58.2 216 28.7
Actinidia08527 Actinidia chinensis HOM05D000118 ORTHO05D000098 1.3e-06 57.8 220 27.3
AUR62024735 Chenopodium quinoa HOM05D000118 ORTHO05D000098 1.3e-06 57.8 225 24.4
Dinv34605 Davidia involucrata HOM05D000118 ORTHO05D000098 1.3e-06 57.8 228 22.8
Lj4A585T50 Lonicera japonica HOM05D000118 ORTHO05D000098 1.3e-06 57.8 216 28.7
RcHm_v2.0_Chr6g0288651 Rosa chinensis HOM05D000118 ORTHO05D050722 1.3e-06 57.8 83 39.8
MSTRG.18311 Avicennia marina HOM05D000118 ORTHO05D000098 1.7e-06 57.4 218 25.2
Cfa015008 Carpinus fangiana HOM05D000118 ORTHO05D000098 1.7e-06 57.4 163 27.0
Gohir.A07G211400 Gossypium hirsutum HOM05D000118 ORTHO05D000098 1.7e-06 57.4 222 24.8
Lj4A583T46 Lonicera japonica HOM05D000118 ORTHO05D000098 1.7e-06 57.4 216 27.8
vmacro02647 Vaccinium macrocarpon HOM05D000118 ORTHO05D000098 1.7e-06 57.4 212 26.4
CiPaw.03G261700 Carya illinoinensis HOM05D000118 ORTHO05D000098 2.2e-06 57.0 229 24.0
Cc02_g37350 Coffea canephora HOM05D000118 ORTHO05D000098 2.2e-06 57.0 240 26.2
Nn8g40490 Nelumbo nucifera HOM05D000118 ORTHO05D000098 2.2e-06 57.0 159 26.4
Psat6g055640 Pisum sativum HOM05D000118 ORTHO05D000098 2.2e-06 57.0 229 24.9
Prupe.8G226000 Prunus persica HOM05D000118 ORTHO05D000098 2.2e-06 57.0 228 22.8
TAR636G1081 Trochodendron aralioides HOM05D000118 ORTHO05D000098 2.2e-06 57.0 155 30.3
Dinv22426 Davidia involucrata HOM05D000118 ORTHO05D000098 2.9e-06 56.6 234 21.8
Oeu032580.1 Olea europaea HOM05D000118 ORTHO05D000098 2.9e-06 56.6 85 35.3
Potri.017G136000 Populus trichocarpa HOM05D000118 ORTHO05D000098 2.9e-06 56.6 127 28.3
Sc13g0005200 Simmondsia chinensis HOM05D000118 ORTHO05D000098 2.9e-06 56.6 221 28.5
vmacro02646 Vaccinium macrocarpon HOM05D000118 ORTHO05D000098 2.9e-06 56.6 226 23.9
Manes.03G165900 Manihot esculenta HOM05D000118 ORTHO05D000098 3.8e-06 56.2 219 26.0
Manes.17G083300 Manihot esculenta HOM05D000118 ORTHO05D000098 3.8e-06 56.2 158 29.1
Medtr1g070185 Medicago truncatula HOM05D000118 ORTHO05D000098 3.8e-06 56.2 230 23.9
Potri.004G083100 Populus trichocarpa HOM05D000118 ORTHO05D000098 3.8e-06 56.2 72 40.3
RcHm_v2.0_Chr4g0392111 Rosa chinensis HOM05D000118 ORTHO05D000098 3.8e-06 56.2 217 26.3
RcHm_v2.0_Chr6g0288551 Rosa chinensis HOM05D000118 ORTHO05D000098 3.8e-06 56.2 227 23.3
VMungo0464G0303 Vigna mungo HOM05D000118 ORTHO05D000098 3.8e-06 56.2 146 26.7
COL.COLO4_05606 Corchorus olitorius HOM05D000118 ORTHO05D000098 4.9e-06 55.8 150 31.3
CsaV3_3G012280 Cucumis sativus L. HOM05D000118 ORTHO05D000098 4.9e-06 55.8 221 26.2
Lj2g0026048 Lotus japonicus HOM05D000118 ORTHO05D000098 4.9e-06 55.8 146 28.1
Thecc.01G261300 Theobroma cacao HOM05D000118 ORTHO05D000098 4.9e-06 55.8 228 27.6
FvH4_4g03260 Fragaria vesca HOM05D000118 ORTHO05D000098 6.4e-06 55.5 220 25.9
Glyma.13G121700 Glycine max HOM05D000118 ORTHO05D000098 6.4e-06 55.5 234 23.5
HanXRQChr10g0281081 Helianthus annuus HOM05D000118 ORTHO05D000098 6.4e-06 55.5 235 24.7
Lj6A661T103 Lonicera japonica HOM05D000118 ORTHO05D000098 6.4e-06 55.5 212 25.5
Manes.13G032400 Manihot esculenta HOM05D000118 ORTHO05D000098 6.4e-06 55.5 225 26.2
arahy.Tifrunner.gnm1.ann1.U818Y8 Arachis hypogaea HOM05D000118 ORTHO05D000098 8.4e-06 55.1 221 24.4
Haze_11340 Corylus avellana HOM05D000118 ORTHO05D025078 8.4e-06 55.1 155 30.3
DCAR_000941 Daucus carota HOM05D000118 ORTHO05D000098 8.4e-06 55.1 164 27.4
Lsat_1_v5_gn_3_121180 Lactuca sativa HOM05D000118 ORTHO05D000098 8.4e-06 55.1 148 27.7
Nitab4.5_0001875g0080 Nicotiana tabacum HOM05D000118 ORTHO05D000098 8.4e-06 55.1 152 28.9
Potri.010G107500 Populus trichocarpa HOM05D000118 ORTHO05D000098 8.4e-06 55.1 213 26.3
QL06p016799 Quercus lobata HOM05D000118 ORTHO05D000098 8.4e-06 55.1 154 30.5
Sabra10G0035200 Salix brachista HOM05D000118 ORTHO05D000098 8.4e-06 55.1 220 25.9
TWI74G1673 Tripterygium wilfordii HOM05D000118 ORTHO05D000098 8.4e-06 55.1 151 30.5
GSVIVG01033875001 Vitis vinifera HOM05D000118 ORTHO05D000098 8.4e-06 55.1 162 23.5


User provided reference genes

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