Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g21281 Fragaria vesca HOM05D008430 ORTHO05D010682 1.3e-227 792.7 410 100.0
FAN24G0841 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.3e-210 734.9 467 85.0
FAN15G0005 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.4e-184 649.0 474 75.3
FAN06G0233 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.0e-171 607.1 486 70.6
FAN06G0355 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.0e-163 578.9 466 69.7
FvH4_7g16371 Fragaria vesca HOM05D008430 ORTHO05D010682 8.7e-147 524.2 461 66.4
FvH4_6g03011 Fragaria vesca HOM05D008430 ORTHO05D010682 1.1e-138 497.3 484 62.0
FAN21G2965 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.7e-123 444.9 385 67.0
FAN06G4766 Fragaria x ananassa HOM05D008430 ORTHO05D010682 9.8e-114 414.5 347 68.6
FAN06G3513 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.3e-113 411.8 346 67.9
FvH4_1g09850 Fragaria vesca HOM05D008430 ORTHO05D010682 2.3e-102 376.7 349 64.5
FAN07G2812 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.7e-97 360.5 304 68.8
FAN25G0164 Fragaria x ananassa HOM05D008430 ORTHO05D010682 9.5e-93 344.7 260 72.7
FAN14G0503 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.1e-92 343.6 270 71.9
FvH4_3g29932 Fragaria vesca HOM05D008430 ORTHO05D010682 3.2e-88 329.7 397 48.9
FAN19G2189 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.1e-80 304.7 207 80.2
FAN05G0822 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.4e-80 303.5 244 68.0
FAN28G0990 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.3e-75 287.0 261 63.6
FAN28G2514 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.7e-73 280.8 260 63.1
FAN21G1308 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.0e-70 271.6 418 42.1
FAN14G5285 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.4e-64 250.4 186 73.7
FAN09G2721 Fragaria x ananassa HOM05D008430 ORTHO05D010682 4.2e-64 249.6 323 52.9
FAN02G1662 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.0e-63 245.7 151 82.8
FAN16G1360 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.5e-45 188.0 134 73.9
FvH4_4g12651 Fragaria vesca HOM05D008430 ORTHO05D010682 8.4e-41 172.2 209 49.3
FvH4_6g32661 Fragaria vesca HOM05D008430 ORTHO05D010682 1.0e-38 165.2 95 88.4
FAN02G1932 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.1e-36 157.5 103 76.7
FAN25G0652 Fragaria x ananassa HOM05D008430 ORTHO05D010682 5.3e-35 152.9 95 83.2
FAN09G4635 Fragaria x ananassa HOM05D008430 ORTHO05D010682 2.2e-28 131.0 199 42.2
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 4.8e-20 103.2 358 27.4
FAN16G3399 Fragaria x ananassa HOM05D008973 ORTHO05D011995 1.5e-18 98.2 150 36.7
RcHm_v2.0_Chr5g0032121 Rosa chinensis HOM05D008430 ORTHO05D011995 2.6e-18 97.4 172 34.9
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 1.3e-17 95.1 432 26.6
FAN07G2503 Fragaria x ananassa HOM05D008430 ORTHO05D010713 2.9e-17 94.0 69 71.0
FAN15G2535 Fragaria x ananassa HOM05D008973 ORTHO05D011995 2.9e-17 94.0 233 30.0
FAN03G0556 Fragaria x ananassa HOM05D008973 ORTHO05D011995 5.0e-17 93.2 216 31.9
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.5e-17 92.8 401 27.4
FAN15G0096 Fragaria x ananassa HOM05D008430 ORTHO05D010682 8.5e-17 92.4 102 46.1
FAN24G3274 Fragaria x ananassa HOM05D008973 ORTHO05D011995 7.2e-16 89.4 270 28.9
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.7e-15 86.7 400 25.8
RcHm_v2.0_Chr1g0350781 Rosa chinensis HOM05D008430 ORTHO05D010682 4.7e-15 86.7 104 46.2
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-14 85.5 393 26.0
FvH4_7g10071 Fragaria vesca HOM05D002480 ORTHO05D003145 6.7e-14 82.8 405 27.2
FvH4_6g19991 Fragaria vesca HOM05D008430 ORTHO05D010682 8.8e-14 82.4 70 65.7
FAN08G0405 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.3e-12 78.6 78 53.8
FAN10G1838 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.1e-11 75.5 290 26.2
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-11 75.5 373 25.2
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-11 75.1 329 26.1
RcHm_v2.0_Chr2g0109311 Rosa chinensis HOM05D008119 ORTHO05D010214 1.4e-11 75.1 103 39.8
FAN07G0316 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.4e-11 74.3 92 42.4
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-11 74.3 211 29.4
FAN26G1563 Fragaria x ananassa HOM05D008973 ORTHO05D011995 3.1e-11 73.9 123 33.3
FvH4_5g30551 Fragaria vesca HOM05D002480 ORTHO05D003145 5.3e-11 73.2 180 33.3
FvH4_7g00272 Fragaria vesca HOM05D008119 ORTHO05D010214 5.3e-11 73.2 190 28.9
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.1e-11 72.4 455 24.0
FvH4_4g20100 Fragaria vesca HOM05D008119 ORTHO05D010214 1.2e-10 72.0 163 31.9
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.5e-10 70.1 455 23.3
FAN25G2720 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.5e-10 70.1 90 42.2
FAN12G4356 Fragaria x ananassa HOM05D008119 ORTHO05D010214 5.9e-10 69.7 253 28.1
FvH4_1g20041 Fragaria vesca HOM05D008119 ORTHO05D010214 7.7e-10 69.3 92 40.2
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 7.7e-10 69.3 440 24.1
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.7e-10 69.3 455 23.7
FAN19G3008 Fragaria x ananassa HOM05D008973 ORTHO05D011995 1.0e-09 68.9 93 34.4
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-09 68.6 414 24.2
FAN08G1660 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-09 68.6 295 27.5
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-09 68.2 401 24.4
FvH4_4g01621 Fragaria vesca HOM05D008119 ORTHO05D010214 2.2e-09 67.8 253 27.7
FvH4_6g07931 Fragaria vesca HOM05D002480 ORTHO05D003145 2.9e-09 67.4 293 27.6
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-09 67.4 253 28.5
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.9e-09 67.4 217 28.1
FAN28G0050 Fragaria x ananassa HOM05D008973 ORTHO05D011995 3.8e-09 67.0 128 32.8
FAN28G2861 Fragaria x ananassa HOM05D008973 ORTHO05D011995 3.8e-09 67.0 128 32.8
RcHm_v2.0_Chr3g0469891 Rosa chinensis HOM05D008119 ORTHO05D010214 3.8e-09 67.0 105 37.1
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-09 66.6 215 29.3
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-09 66.6 273 28.6
FAN13G2480 Fragaria x ananassa HOM05D008430 ORTHO05D010682 6.5e-09 66.2 204 30.4
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 1.5e-08 65.1 342 24.6
FvH4_6g10711 Fragaria vesca HOM05D008430 ORTHO05D010682 1.5e-08 65.1 92 42.4
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.5e-08 64.3 488 24.0
FAN12G3740 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.2e-08 63.9 52 57.7
FAN14G3390 Fragaria x ananassa HOM05D008430 ORTHO05D010682 3.2e-08 63.9 92 42.4
FAN06G1617 Fragaria x ananassa HOM05D008119 ORTHO05D010214 4.2e-08 63.5 190 28.4
FvH4_4g13902 Fragaria vesca HOM05D008119 ORTHO05D010214 7.2e-08 62.8 213 27.2
FAN16G2250 Fragaria x ananassa HOM05D008119 ORTHO05D010214 9.4e-08 62.4 211 29.4
FAN16G3021 Fragaria x ananassa HOM05D008430 ORTHO05D010682 1.6e-07 61.6 74 45.9
FAN06G0453 Fragaria x ananassa HOM05D008119 ORTHO05D010214 2.1e-07 61.2 160 31.2
FvH4_2g30300 Fragaria vesca HOM05D008430 ORTHO05D010682 3.6e-07 60.5 69 47.8
FvH4_4g13621 Fragaria vesca HOM05D002480 ORTHO05D003145 3.6e-07 60.5 171 32.7
FAN04G2250 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-07 60.5 193 28.5
FvH4_5g37291 Fragaria vesca HOM05D002480 ORTHO05D003145 4.7e-07 60.1 190 27.9
FAN16G2492 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.0e-07 59.3 317 24.6
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 8.0e-07 59.3 209 27.3
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-06 58.2 338 25.1
FAN21G0152 Fragaria x ananassa HOM05D008119 ORTHO05D010214 1.8e-06 58.2 81 39.5
Manes.04G087125 Manihot esculenta HOM05D000003 ORTHO05D000006 2.3e-06 57.8 172 25.6
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.0e-06 57.0 299 25.8
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 5.2e-06 56.6 186 28.0
RcHm_v2.0_Chr1g0320861 Rosa chinensis HOM05D009201 ORTHO05D005238 6.7e-06 56.2 113 32.7
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.8e-06 55.8 352 23.9


User provided reference genes

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