Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 4.2e-99 364.8 195 100.0
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 2.0e-93 345.9 195 89.7
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 1.4e-89 333.2 176 99.4
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.6e-88 328.9 176 98.3
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 8.8e-81 303.9 161 98.1
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 2.1e-66 256.1 199 70.4
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 6.8e-65 251.1 180 71.1
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 2.9e-63 245.7 181 70.7
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 3.5e-61 238.8 202 60.4
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 1.0e-60 237.3 196 61.7
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 1.7e-60 236.5 195 65.1
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 1.1e-59 233.8 198 61.6
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 1.9e-59 233.0 175 62.9
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 4.3e-59 231.9 175 62.3
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 2.8e-58 229.2 178 64.0
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 3.6e-58 228.8 195 60.0
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 1.4e-57 226.9 177 63.8
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 1.8e-57 226.5 179 64.2
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 8.9e-57 224.2 195 57.4
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 1.2e-56 223.8 177 62.1
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 1.2e-56 223.8 176 63.1
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 2.0e-56 223.0 181 60.8
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 2.6e-56 222.6 177 62.1
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 2.6e-56 222.6 177 60.5
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 4.4e-56 221.9 201 60.2
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 5.8e-56 221.5 175 63.4
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 7.5e-56 221.1 199 57.8
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 7.5e-56 221.1 177 60.5
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 9.8e-56 220.7 177 61.0
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.7e-55 219.9 199 57.3
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 4.9e-55 218.4 177 62.1
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 6.4e-55 218.0 194 56.2
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.1e-54 217.2 199 56.8
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.1e-54 217.2 198 56.1
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 1.4e-54 216.9 179 62.0
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 2.4e-54 216.1 194 58.2
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 2.4e-54 216.1 111 96.4
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 3.2e-54 215.7 182 62.6
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 5.4e-54 214.9 176 60.8
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 7.0e-54 214.5 183 60.7
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 2.0e-53 213.0 169 60.9
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 4.6e-53 211.8 197 55.8
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.3e-52 210.3 199 56.8
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 1.3e-52 210.3 188 56.4
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 2.3e-52 209.5 206 54.9
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 3.9e-52 208.8 181 57.5
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 5.0e-52 208.4 170 60.6
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 5.0e-52 208.4 179 58.1
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 1.5e-51 206.8 170 60.0
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 1.9e-51 206.5 179 58.7
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 2.5e-51 206.1 178 56.2
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 7.3e-51 204.5 179 58.7
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 1.2e-50 203.8 177 56.5
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.6e-50 203.4 177 57.6
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 1.4e-49 200.3 177 57.6
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 1.4e-49 200.3 195 52.8
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 1.8e-49 199.9 177 56.5
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 2.3e-49 199.5 155 58.1
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 4.0e-49 198.7 176 56.2
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 6.8e-49 198.0 168 58.9
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 6.8e-49 198.0 195 51.8
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 1.2e-48 197.2 168 59.5
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.0e-48 196.4 154 60.4
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 2.0e-48 196.4 170 56.5
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 3.4e-48 195.7 179 55.3
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 5.8e-48 194.9 175 56.0
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 5.8e-48 194.9 171 56.1
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 5.8e-48 194.9 176 55.1
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 7.5e-48 194.5 170 56.5
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 7.5e-48 194.5 170 58.8
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 7.5e-48 194.5 197 53.3
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 9.9e-48 194.1 198 50.5
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 9.9e-48 194.1 195 51.3
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 1.3e-47 193.7 168 58.3
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 1.3e-47 193.7 176 55.7
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 1.7e-47 193.4 181 54.1
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 1.7e-47 193.4 170 55.9
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 2.2e-47 193.0 170 57.6
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 2.2e-47 193.0 170 57.6
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 2.2e-47 193.0 170 57.6
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 3.7e-47 192.2 177 56.5
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 3.7e-47 192.2 172 55.8
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 6.4e-47 191.4 197 53.8
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 6.4e-47 191.4 157 56.7
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 1.9e-46 189.9 167 54.5
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 3.2e-46 189.1 300 39.0
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 9.2e-46 187.6 155 58.1
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 1.2e-45 187.2 167 56.3
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 6.0e-45 184.9 160 51.9
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 3.9e-44 182.2 181 49.7
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 5.1e-44 181.8 154 55.8
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 5.6e-43 178.3 178 51.1
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 3.6e-42 175.6 181 50.3
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 6.8e-41 171.4 130 66.2
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 1.5e-40 170.2 130 64.6
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 4.9e-39 165.2 190 48.4
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 5.1e-36 155.2 173 45.7
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 3.3e-35 152.5 152 48.0
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 2.1e-34 149.8 183 45.4
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 3.1e-33 146.0 123 60.2
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 2.0e-32 143.3 177 43.5
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 1.2e-29 134.0 140 41.4
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 3.9e-28 129.0 92 60.9
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 1.1e-27 127.5 118 50.0
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.3e-27 125.9 102 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 1.4e-25 120.6 131 46.6
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 9.9e-24 114.4 113 47.8
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.7e-23 113.6 148 43.2
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.8e-20 103.6 97 47.4
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 2.8e-18 96.3 137 40.1
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 2.0e-16 90.1 54 68.5
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 5.5e-14 82.0 127 35.4
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 8.7e-12 74.7 67 59.7
MCO16G209 Micromonas commoda HOM05D007042 ORTHO05D008441 3.8e-07 59.3 177 28.2
EL10As2g23173 Beta vulgaris HOM05D007042 ORTHO05D008441 8.4e-07 58.2 47 53.2


User provided reference genes

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