Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 3.3e-28 129.0 165 100.0
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 2.4e-26 122.9 64 98.4
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 5.3e-26 121.7 63 100.0
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 6.9e-26 121.3 64 96.9
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 9.6e-20 100.9 64 84.4
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 2.1e-14 83.2 64 76.6
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 3.3e-12 75.9 61 75.4
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 2.0e-09 66.6 64 60.9
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.7e-08 63.5 60 58.3
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.7e-08 63.5 64 59.4
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 1.7e-08 63.5 65 60.0
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 2.2e-08 63.2 66 59.1
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 3.8e-08 62.4 60 56.7
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 4.9e-08 62.0 64 59.4
Sopen09g025140 Solanum pennellii HOM05D014142 ORTHO05D006413 6.5e-08 61.6 62 56.5
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 1.4e-07 60.5 63 57.1
PGSC0003DMG400015809 Solanum tuberosum HOM05D014142 ORTHO05D006413 1.4e-07 60.5 56 58.9
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.9e-07 60.1 80 53.8
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 2.5e-07 59.7 67 56.7
Nitab4.5_0001657g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 3.2e-07 59.3 64 54.7
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 3.2e-07 59.3 60 61.7
Sopen09g025130 Solanum pennellii HOM05D014142 ORTHO05D006413 3.2e-07 59.3 61 55.7
Nitab4.5_0000813g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 4.2e-07 58.9 64 53.1
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 5.5e-07 58.5 62 58.1
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 7.1e-07 58.2 62 56.5
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 2.1e-06 56.6 65 58.5
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.1e-06 56.6 59 59.3
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 2.1e-06 56.6 71 53.5
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 2.7e-06 56.2 57 52.6
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 2.7e-06 56.2 64 48.4
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.5e-06 55.8 62 53.2
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 3.5e-06 55.8 60 58.3
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 4.6e-06 55.5 63 52.4
CAN.G5.23 Capsicum annuum HOM05D014142 ORTHO05D006413 4.6e-06 55.5 63 50.8
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 7.9e-06 54.7 65 58.5
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 7.9e-06 54.7 63 54.0
Glyma.19G171800 Glycine max HOM05D007427 ORTHO05D006413 7.9e-06 54.7 66 51.5
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 7.9e-06 54.7 71 54.9


User provided reference genes

Program Settings