Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g19461 Fragaria vesca HOM05D005131 ORTHO05D006645 1.1e-72 276.6 136 100.0
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 8.8e-11 70.9 66 59.1
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 1.1e-10 70.5 66 59.1
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 1.5e-10 70.1 66 59.1
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 3.3e-10 68.9 66 57.6
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 3.3e-10 68.9 66 57.6
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 3.3e-10 68.9 66 57.6
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 3.3e-10 68.9 66 57.6
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 3.3e-10 68.9 66 57.6
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 5.7e-10 68.2 66 54.5
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.7e-10 68.2 66 54.5
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.7e-10 68.2 66 54.5
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.7e-10 68.2 64 54.7
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 7.4e-10 67.8 66 56.1
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 9.7e-10 67.4 66 56.1
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 9.7e-10 67.4 66 56.1
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 9.7e-10 67.4 63 55.6
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.3e-09 67.0 66 54.5
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 3.7e-09 65.5 66 56.1
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 3.7e-09 65.5 66 53.0
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 3.7e-09 65.5 66 53.0
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 3.7e-09 65.5 66 54.5
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 4.8e-09 65.1 66 53.0
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 6.3e-09 64.7 66 53.0
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 6.3e-09 64.7 66 53.0
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 6.3e-09 64.7 66 53.0
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 6.3e-09 64.7 66 53.0
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 8.2e-09 64.3 66 53.0
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 8.2e-09 64.3 66 53.0
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 1.1e-08 63.9 66 53.0
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 1.1e-08 63.9 66 53.0
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 1.4e-08 63.5 63 54.0
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 1.8e-08 63.2 57 54.4
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 2.4e-08 62.8 63 52.4
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 3.1e-08 62.4 51 52.9
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 3.1e-08 62.4 63 54.0
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 3.1e-08 62.4 66 51.5
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 4.1e-08 62.0 57 54.4
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 4.1e-08 62.0 66 50.0
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 5.3e-08 61.6 66 50.0
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 7.0e-08 61.2 66 50.0
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 7.0e-08 61.2 63 52.4
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 7.0e-08 61.2 66 50.0
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 9.1e-08 60.8 66 50.0
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 9.1e-08 60.8 66 53.0
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 9.1e-08 60.8 51 51.0
Sabra16G0069400 Salix brachista HOM05D005131 ORTHO05D006645 1.2e-07 60.5 51 52.9
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 50.0
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 50.0
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 50.0
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 50.0
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 50.0
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 1.5e-07 60.1 66 51.5
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 1.5e-07 60.1 60 53.3
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 2.0e-07 59.7 66 53.0
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 2.0e-07 59.7 51 51.0
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 2.0e-07 59.7 57 50.9
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 2.0e-07 59.7 53 56.6
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 2.0e-07 59.7 51 49.0
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 2.0e-07 59.7 66 50.0
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 2.6e-07 59.3 52 57.7
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 3.4e-07 58.9 63 50.8
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 3.4e-07 58.9 66 50.0
MBI12_g38626_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 3.4e-07 58.9 53 56.6
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 4.5e-07 58.5 63 50.8
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 4.5e-07 58.5 51 49.0
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 4.5e-07 58.5 53 54.7
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 4.5e-07 58.5 59 54.2
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 4.5e-07 58.5 51 49.0
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 4.5e-07 58.5 51 49.0
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 4.5e-07 58.5 64 48.4
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 5.9e-07 58.2 63 50.8
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 5.9e-07 58.2 57 52.6
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 5.9e-07 58.2 57 49.1
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 5.9e-07 58.2 51 49.0
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 7.7e-07 57.8 66 47.0
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 7.7e-07 57.8 57 50.9
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 7.7e-07 57.8 51 49.0
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 1.0e-06 57.4 51 49.0
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 1.0e-06 57.4 51 47.1
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 1.3e-06 57.0 63 49.2
Psat3g205680 Pisum sativum HOM05D005131 ORTHO05D006645 1.3e-06 57.0 57 52.6
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 1.3e-06 57.0 57 50.9
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 2.2e-06 56.2 63 46.0
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 2.2e-06 56.2 57 47.4
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 2.2e-06 56.2 63 49.2
MELO3C031004.2 Cucumis melo HOM05D005131 ORTHO05D006645 2.9e-06 55.8 57 49.1
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 2.9e-06 55.8 51 45.1
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 2.9e-06 55.8 51 43.1
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 2.9e-06 55.8 51 43.1
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 2.9e-06 55.8 51 43.1
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 2.9e-06 55.8 51 45.1
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 2.9e-06 55.8 57 49.1
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 3.8e-06 55.5 57 49.1
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 3.8e-06 55.5 52 53.8
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 5.0e-06 55.1 60 50.0
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 5.0e-06 55.1 58 51.7
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 5.0e-06 55.1 57 49.1
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 8.5e-06 54.3 51 43.1
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 8.5e-06 54.3 51 43.1
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 8.5e-06 54.3 51 43.1


User provided reference genes

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