Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 9.3e-121 436.8 208 100.0
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.0e-119 433.3 208 99.0
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 1.6e-117 426.0 203 100.0
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 4.0e-116 421.4 208 96.2
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 7.1e-113 410.6 208 94.7
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 1.8e-87 326.2 207 79.2
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 2.0e-86 322.8 208 78.4
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 9.1e-84 313.9 207 76.8
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.0e-71 273.9 215 67.0
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 4.8e-69 265.0 211 66.4
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 8.3e-69 264.2 216 64.8
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 2.5e-65 252.7 214 63.1
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 3.3e-65 252.3 213 62.4
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 9.5e-65 250.8 189 65.1
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.2e-64 250.4 216 62.5
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.6e-64 250.0 202 63.9
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.1e-64 249.6 216 62.0
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.8e-64 249.2 217 62.2
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.6e-64 248.8 217 62.2
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.0e-64 247.7 216 62.0
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 6.8e-63 244.6 216 62.0
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.3e-61 240.4 207 62.8
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 1.3e-61 240.4 209 63.6
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 2.2e-61 239.6 216 59.7
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 2.2e-61 239.6 230 57.0
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 3.1e-60 235.7 206 59.7
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.4e-60 235.0 207 62.8
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 9.2e-60 234.2 204 56.9
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 3.8e-58 228.8 209 59.8
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 3.8e-58 228.8 205 55.1
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.1e-57 227.3 207 57.0
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 2.5e-57 226.1 204 56.9
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 9.5e-57 224.2 206 59.7
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 8.0e-56 221.1 203 56.2
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.5e-54 216.9 214 54.7
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 2.2e-53 213.0 221 52.5
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 2.9e-53 212.6 209 54.5
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 8.3e-53 211.1 212 55.7
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 8.3e-53 211.1 220 51.8
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-52 210.3 215 54.0
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 1.4e-52 210.3 213 54.5
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.9e-52 209.9 215 54.4
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 3.2e-52 209.1 215 52.6
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 7.0e-52 208.0 211 55.0
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.7e-50 203.4 204 52.0
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 3.9e-50 202.2 195 56.9
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 2.5e-49 199.5 213 54.0
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 4.7e-48 195.3 206 53.4
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 1.4e-47 193.7 180 55.6
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.7e-45 186.8 199 50.3
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 4.9e-45 185.3 160 56.9
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 2.5e-41 172.9 199 48.7
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 7.3e-41 171.4 205 48.3
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 4.7e-40 168.7 194 49.0
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 2.0e-38 163.3 197 48.2
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 2.2e-37 159.8 156 51.9
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 4.1e-36 155.6 238 42.4
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.0e-34 151.0 146 54.8
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 6.6e-34 148.3 112 65.2
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.8e-31 140.2 210 42.4
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.9e-29 132.9 120 55.8
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 2.9e-29 132.9 206 42.7
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 4.9e-29 132.1 183 43.7
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 8.4e-29 131.3 182 45.1
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 2.7e-27 126.3 183 40.4
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 6.0e-27 125.2 181 42.5
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 5.6e-25 118.6 106 58.5
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 5.6e-25 118.6 219 36.1
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 9.6e-25 117.9 113 54.0
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.6e-24 117.1 113 54.0
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 2.8e-24 116.3 174 41.4
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 6.9e-23 111.7 96 59.4
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 7.6e-22 108.2 93 63.4
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.1e-19 100.1 96 59.4
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 6.0e-19 98.6 97 56.7
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.1e-17 94.4 98 56.1
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 4.3e-17 92.4 95 48.4
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 3.2e-12 76.3 79 57.0
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.2e-12 75.9 67 58.2


User provided reference genes

Program Settings