Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 1.3e-31 140.6 68 100.0
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.9e-10 68.9 36 91.7
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.9e-10 68.9 36 91.7
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 4.9e-10 68.9 36 91.7
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 1.4e-09 67.4 36 88.9
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.2e-08 64.3 36 86.1
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 1.6e-08 63.9 36 83.3
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 5.9e-08 62.0 36 80.6
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 5.9e-08 62.0 36 80.6
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 5.9e-08 62.0 36 80.6
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 5.9e-08 62.0 33 87.9
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 5.9e-08 62.0 34 88.2
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 7.7e-08 61.6 35 82.9
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 7.7e-08 61.6 35 82.9
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 7.7e-08 61.6 35 82.9
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 7.7e-08 61.6 35 80.0
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 7.7e-08 61.6 35 82.9
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 1.0e-07 61.2 34 85.3
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 1.3e-07 60.8 36 80.6
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.7e-07 60.5 36 77.8
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.7e-07 60.5 36 77.8
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.3e-07 60.1 36 77.8
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.3e-07 60.1 36 77.8
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 2.9e-07 59.7 35 80.0
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 2.9e-07 59.7 35 80.0
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 2.9e-07 59.7 35 80.0
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 2.9e-07 59.7 34 82.4
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 2.9e-07 59.7 34 82.4
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 3.8e-07 59.3 36 77.8
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 3.8e-07 59.3 34 82.4
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 3.8e-07 59.3 34 82.4
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 5.0e-07 58.9 35 80.0
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 6.6e-07 58.5 36 75.0
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 6.6e-07 58.5 36 75.0
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 6.6e-07 58.5 36 77.8
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 8.6e-07 58.2 34 79.4
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.1e-06 57.8 36 75.0
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 1.1e-06 57.8 34 79.4
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.1e-06 57.8 34 79.4
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.5e-06 57.4 34 82.4
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 1.9e-06 57.0 36 75.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 1.9e-06 57.0 33 78.8
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.9e-06 57.0 35 74.3
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.9e-06 57.0 35 74.3
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.9e-06 57.0 36 72.2
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 3.3e-06 56.2 32 81.2
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 3.3e-06 56.2 36 72.2
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 3.3e-06 56.2 31 83.9
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 3.3e-06 56.2 35 71.4
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 3.3e-06 56.2 35 71.4
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 3.3e-06 56.2 36 72.2
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 3.3e-06 56.2 38 76.3
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 3.3e-06 56.2 34 79.4
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 4.3e-06 55.8 29 89.7
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 4.3e-06 55.8 34 76.5
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 4.3e-06 55.8 36 72.2
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 5.6e-06 55.5 32 81.2
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 5.6e-06 55.5 35 74.3
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 7.3e-06 55.1 36 72.2


User provided reference genes

Program Settings