Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 5.3e-257 890.6 470 100.0
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.3e-239 832.8 478 93.9
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.3e-231 806.2 478 91.0
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-223 780.0 427 97.0
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.2e-195 686.8 489 77.7
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 5.9e-123 445.3 501 57.3
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 2.7e-107 393.3 486 52.5
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 6.0e-99 365.5 509 49.3
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.5e-97 360.9 520 48.3
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 4.3e-97 359.4 505 50.7
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.2e-88 331.3 510 48.6
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 3.1e-87 326.6 468 50.6
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 7.5e-86 322.0 494 46.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 8.3e-85 318.5 516 46.7
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.4e-84 315.8 489 47.4
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 1.2e-83 314.7 510 47.1
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 3.3e-81 306.6 505 48.1
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 3.6e-80 303.1 535 44.3
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.9e-76 290.8 493 43.2
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.2e-76 289.7 526 46.4
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 4.3e-73 279.6 499 44.9
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.7e-69 267.7 457 44.6
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 4.9e-69 266.2 499 43.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 8.4e-69 265.4 487 42.5
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.1e-68 265.0 541 40.9
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.4e-68 263.8 448 45.1
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.4e-68 262.7 477 43.8
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.0e-66 258.5 496 42.5
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.1e-65 255.0 505 42.6
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.1e-64 250.8 494 42.1
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.4e-63 248.1 448 43.8
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.4e-63 248.1 517 40.4
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 9.0e-63 245.4 475 44.4
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 7.1e-60 235.7 448 43.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 8.7e-58 228.8 519 39.9
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.5e-57 228.0 497 41.6
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.3e-57 226.9 483 40.8
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 4.3e-57 226.5 446 41.5
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 2.8e-56 223.8 472 40.0
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.8e-56 223.8 289 51.9
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 1.8e-55 221.1 517 39.7
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.4e-55 220.7 518 39.6
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 6.9e-55 219.2 403 42.7
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 2.0e-54 217.6 492 41.1
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 5.8e-54 216.1 468 39.1
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.2e-53 214.2 490 40.4
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 3.8e-53 213.4 475 40.0
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.2e-52 210.3 445 41.3
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.2e-51 208.4 475 39.6
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.0e-50 205.3 483 40.6
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.8e-50 204.5 237 54.4
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.9e-50 203.4 498 37.8
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.5e-49 201.4 453 37.5
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.9e-49 201.1 443 40.0
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 5.7e-49 199.5 510 39.2
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.3e-48 198.4 458 40.8
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 2.1e-48 197.6 475 38.3
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 2.1e-48 197.6 475 38.3
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.8e-47 194.5 475 36.2
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.4e-47 194.1 445 38.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.2e-46 191.8 461 38.4
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 7.6e-46 189.1 285 50.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 1.0e-45 188.7 556 35.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 2.1e-43 181.0 493 38.5
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.3e-42 178.3 513 35.9
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 5.1e-42 176.4 392 40.8
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.1e-41 175.3 504 34.5
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 5.7e-41 172.9 406 37.9
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 9.7e-41 172.2 463 38.2
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 4.8e-40 169.9 399 41.4
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.4e-39 168.3 465 35.9
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 3.1e-39 167.2 485 37.1
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 2.2e-37 161.0 264 45.5
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 3.8e-37 160.2 462 36.8
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 3.2e-36 157.1 220 50.9
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 4.6e-35 153.3 218 47.2
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 4.6e-35 153.3 492 35.6
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 7.9e-35 152.5 146 61.0
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.4e-34 151.8 497 35.0
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 2.3e-34 151.0 434 35.5
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 8.8e-34 149.1 430 35.6
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.1e-33 148.7 491 34.6
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.0e-33 147.9 487 34.7
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 2.0e-33 147.9 634 28.9
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.3e-32 145.2 364 39.8
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.3e-32 145.2 498 34.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 6.3e-32 142.9 146 58.2
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.1e-31 142.1 464 35.6
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 2.4e-31 141.0 200 49.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 4.1e-31 140.2 442 33.9
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 5.3e-31 139.8 190 48.9
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 9.1e-31 139.0 280 40.4
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 9.1e-31 139.0 435 35.2
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.2e-30 138.7 408 35.8
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 2.6e-30 137.5 414 36.5
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 4.5e-30 136.7 468 34.8
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 4.5e-30 136.7 518 33.2
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.3e-29 135.2 408 35.0
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.9e-29 134.0 135 57.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.6e-27 128.3 374 37.2
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 2.7e-27 127.5 477 32.9
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 5.1e-26 123.2 440 33.9
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 8.8e-26 122.5 480 32.5
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 2.2e-24 117.9 77 80.5
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 2.2e-24 117.9 499 32.7
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 7.0e-23 112.8 439 30.8
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.0e-22 111.3 326 37.4
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.0e-21 109.0 325 37.2
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 1.3e-21 108.6 446 33.0
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 9.4e-20 102.4 107 52.3
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.6e-19 101.7 155 45.8
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.1e-19 101.3 74 74.3
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 6.1e-19 99.8 427 32.1
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 8.0e-19 99.4 175 43.4
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 7.4e-17 92.8 281 34.2
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 7.4e-17 92.8 281 34.2
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 9.4e-12 75.9 359 30.9
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.0e-11 72.8 66 60.6
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.6e-09 67.8 105 41.0
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 2.4e-07 61.2 437 26.5
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 2.7e-06 57.8 408 26.2


User provided reference genes

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