Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g13780 Fragaria vesca HOM05D003013 ORTHO05D045932 6.4e-31 136.7 67 100.0
FAN24G0507 Fragaria x ananassa HOM05D003013 ORTHO05D045932 1.6e-13 79.0 40 92.5
Aqoxy5G00181 Aquilegia oxysepala HOM05D003013 ORTHO05D003460 4.9e-07 57.4 41 65.9
FvH4_4g04080 Fragaria vesca HOM05D003013 ORTHO05D003460 4.9e-07 57.4 40 70.0
FAN12G1441 Fragaria x ananassa HOM05D003013 ORTHO05D003460 4.9e-07 57.4 40 70.0
FAN22G1503 Fragaria x ananassa HOM05D003013 ORTHO05D003460 4.9e-07 57.4 40 70.0
RcHm_v2.0_Chr4g0394471 Rosa chinensis HOM05D003013 ORTHO05D003460 4.9e-07 57.4 40 70.0
FvH4_3g01800 Fragaria vesca HOM05D003013 ORTHO05D003460 8.4e-07 56.6 40 67.5
FAN21G0805 Fragaria x ananassa HOM05D003013 ORTHO05D003460 1.1e-06 56.2 40 67.5
FAN25G1159 Fragaria x ananassa HOM05D003013 ORTHO05D003460 1.1e-06 56.2 40 67.5
PGR004G0773 Punica granatum HOM05D003013 ORTHO05D003460 1.4e-06 55.8 40 65.0
Cfa014749 Carpinus fangiana HOM05D003013 ORTHO05D003460 1.9e-06 55.5 26 92.3
CiPaw.01G181100 Carya illinoinensis HOM05D003013 ORTHO05D003460 1.9e-06 55.5 26 92.3
Haze_11424 Corylus avellana HOM05D003013 ORTHO05D003460 1.9e-06 55.5 26 92.3
MELO3C023014.2 Cucumis melo HOM05D003013 ORTHO05D003460 1.9e-06 55.5 26 92.3
Hma1.2p1_0112F.1_g054410 Hydrangea macrophylla HOM05D003013 ORTHO05D003460 1.9e-06 55.5 26 92.3
GSVIVG01027860001 Vitis vinifera HOM05D003013 ORTHO05D003460 1.9e-06 55.5 40 62.5
CAN.G1234.3 Capsicum annuum HOM05D003013 ORTHO05D003460 2.5e-06 55.1 40 65.0
CiPaw.02G108900 Carya illinoinensis HOM05D003013 ORTHO05D003460 2.5e-06 55.1 40 65.0
Lj6A627T16 Lonicera japonica HOM05D003013 ORTHO05D003460 2.5e-06 55.1 26 88.5
SEGI_39887 Sequoiadendron giganteum HOM05D003013 ORTHO05D003460 2.5e-06 55.1 41 61.0
ClCG06G007120 Citrullus lanatus HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
Dinv29832 Davidia involucrata HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
Eucgr.H03015 Eucalyptus grandis HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
MBI18_g23121_MAGBIO Magnolia biondii HOM05D003013 ORTHO05D003460 3.2e-06 54.7 40 62.5
Peaxi162Scf00579g00318 Petunia axillaris HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
Sed0013412 Sechium edule HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
Sed0019923 Sechium edule HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
TAR362G1161 Trochodendron aralioides HOM05D003013 ORTHO05D003460 3.2e-06 54.7 26 88.5
TAR633G2733 Trochodendron aralioides HOM05D003013 ORTHO05D003460 3.2e-06 54.7 40 60.0
MSTRG.14636 Avicennia marina HOM05D003013 ORTHO05D003460 4.2e-06 54.3 40 65.0
CsaV3_2G012630 Cucumis sativus L. HOM05D003013 ORTHO05D003460 4.2e-06 54.3 26 88.5
Actinidia11359 Actinidia chinensis HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 84.6
Cpa.g.sc44.41 Carica papaya HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 88.5
Duzib151G0688 Durio zibethinus HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 88.5
Nitab4.5_0002333g0100 Nicotiana tabacum HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 88.5
Prupe.4G018300 Prunus persica HOM05D003013 ORTHO05D003460 5.5e-06 53.9 27 85.2
RcHm_v2.0_Chr5g0002631 Rosa chinensis HOM05D003013 ORTHO05D003460 5.5e-06 53.9 40 65.0
Thecc.04G259600 Theobroma cacao HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 88.5
TWI53G1337 Tripterygium wilfordii HOM05D003013 ORTHO05D003460 5.5e-06 53.9 26 84.6
AUR62002168 Chenopodium quinoa HOM05D003013 ORTHO05D003460 7.1e-06 53.5 26 84.6
AUR62015541 Chenopodium quinoa HOM05D003013 ORTHO05D003460 7.1e-06 53.5 26 84.6
Dinv20068 Davidia involucrata HOM05D001110 ORTHO05D000942 7.1e-06 53.5 40 65.0
Lsat_1_v5_gn_1_129780 Lactuca sativa HOM05D003013 ORTHO05D003460 7.1e-06 53.5 27 85.2
Nn1g02850 Nelumbo nucifera HOM05D003013 ORTHO05D003460 7.1e-06 53.5 26 80.8
Nn3g19726 Nelumbo nucifera HOM05D003013 ORTHO05D003460 7.1e-06 53.5 26 80.8
Nitab4.5_0004700g0010 Nicotiana tabacum HOM05D003013 ORTHO05D003460 7.1e-06 53.5 26 84.6
Migut.H01577 Erythranthe guttata HOM05D003013 ORTHO05D003460 9.3e-06 53.1 40 62.5
Gohir.A09G228500 Gossypium hirsutum HOM05D003013 ORTHO05D003460 9.3e-06 53.1 26 84.6
Gohir.D09G229600 Gossypium hirsutum HOM05D003013 ORTHO05D003460 9.3e-06 53.1 26 84.6
Gorai.006G252300 Gossypium raimondii HOM05D003013 ORTHO05D003460 9.3e-06 53.1 26 84.6


User provided reference genes

Program Settings