Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 3.2e-107 391.7 195 100.0
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.5e-48 194.5 102 93.1
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.2e-42 174.9 97 88.7
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 3.8e-23 112.5 248 37.5
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-23 112.5 248 37.5
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-22 110.9 252 36.9
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-22 109.4 234 35.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-22 108.6 258 34.9
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-21 107.5 247 33.6
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-21 107.1 234 35.5
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-20 103.6 266 31.2
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 6.7e-20 101.7 271 32.8
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-19 99.8 216 33.3
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 4.3e-19 99.0 206 35.4
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.6e-19 98.6 216 32.9
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-18 97.4 249 34.5
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 2.1e-18 96.7 216 32.4
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 2.1e-18 96.7 241 32.0
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-18 96.7 226 32.7
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.8e-18 95.5 206 33.0
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 6.2e-18 95.1 225 34.7
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.1e-18 94.7 226 32.3
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-17 93.2 234 34.2
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-17 93.2 241 31.1
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-17 92.8 183 37.7
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 4.0e-17 92.4 197 34.5
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-16 90.1 212 34.9
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 2.0e-16 90.1 265 30.2
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-16 89.7 219 32.9
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 4.5e-16 89.0 257 31.1
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.6e-16 88.2 269 32.3
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 7.6e-16 88.2 260 29.2
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.9e-16 87.8 106 50.9
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-15 87.4 225 34.2
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 1.7e-15 87.0 202 34.2
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.2e-15 86.7 265 30.2
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 6.4e-15 85.1 235 31.1
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 1.9e-14 83.6 258 29.5
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-14 83.2 112 47.3
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-14 83.2 112 47.3
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-14 81.6 220 31.4
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-14 81.6 220 31.4
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-14 81.6 112 46.4
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-13 80.1 215 31.2
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-13 79.7 191 33.0
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 2.7e-13 79.7 194 34.5
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-13 79.0 200 31.5
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-13 79.0 214 30.4
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 7.9e-13 78.2 123 42.3
Prupe.1G004300 Prunus persica HOM05D006368 ORTHO05D006739 1.3e-12 77.4 60 61.7
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 2.3e-12 76.6 214 29.9
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-12 76.6 214 29.9
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 3.9e-12 75.9 235 29.4
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-11 72.4 217 31.8
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.6e-11 72.0 235 30.6
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-11 71.6 195 31.3
FAN13G2642 Fragaria x ananassa HOM05D010931 ORTHO05D013603 7.4e-11 71.6 129 37.2
Prupe.1G019300 Prunus persica HOM05D006368 ORTHO05D006739 9.6e-11 71.2 62 53.2
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-10 70.9 100 45.0
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-10 70.5 233 29.6
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-10 70.5 179 33.0
FAN13G2892 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.4e-09 67.4 129 36.4
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-09 67.0 60 60.0
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-09 67.0 60 60.0
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 4.0e-09 65.9 217 28.6
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.3e-09 65.5 105 41.0
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 6.9e-09 65.1 123 40.7
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 6.9e-09 65.1 248 28.6
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.2e-08 64.3 225 29.8
FAN25G2077 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.6e-08 63.2 121 33.9
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.4e-08 62.8 113 39.8
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.4e-08 62.8 107 43.9
Dinv26642 Davidia involucrata HOM05D006368 ORTHO05D015099 5.8e-08 62.0 96 38.5
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.6e-08 61.6 196 30.1
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-07 60.8 65 52.3
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 1.7e-07 60.5 183 30.1
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-07 60.1 204 29.4
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-07 59.7 190 30.5
TPR.G38190 Trifolium pratense HOM05D000151 ORTHO05D000074 2.9e-07 59.7 196 28.1
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.4e-07 58.2 286 26.6
FvH4_6g47161 Fragaria vesca HOM05D006368 ORTHO05D035370 1.9e-06 57.0 59 52.5
FAN14G2825 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-06 57.0 59 52.5
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-06 56.2 65 46.2
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 4.2e-06 55.8 99 43.4
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 4.2e-06 55.8 76 44.7
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 5.5e-06 55.5 206 26.2
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 5.5e-06 55.5 92 38.0
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 7.1e-06 55.1 61 49.2
COL.COLO4_26063 Corchorus olitorius HOM05D000151 ORTHO05D000074 7.1e-06 55.1 65 47.7
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 9.3e-06 54.7 62 41.9
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 9.3e-06 54.7 194 26.8
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 9.3e-06 54.7 191 25.1
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 9.3e-06 54.7 190 26.8


User provided reference genes

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