Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 2.7e-82 308.5 146 100.0
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.0e-58 227.6 110 99.1
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.9e-56 222.6 112 96.4
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.9e-56 222.6 112 96.4
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-56 221.5 112 95.5
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 5.6e-56 221.1 112 95.5
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 4.8e-55 218.0 112 93.8
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 5.1e-49 198.0 112 85.7
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.5e-48 196.4 112 83.0
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 3.3e-48 195.3 112 83.0
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 3.3e-48 195.3 112 81.2
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 5.6e-48 194.5 112 82.1
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 7.4e-48 194.1 112 83.0
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 9.6e-48 193.7 112 83.9
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.3e-47 193.4 112 82.1
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 83.0
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 83.0
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 83.0
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 83.0
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 82.1
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.6e-47 193.0 112 84.8
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.8e-47 192.2 112 82.1
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 2.8e-47 192.2 112 82.1
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.8e-47 192.2 112 83.0
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.7e-47 191.8 112 83.0
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 3.7e-47 191.8 112 81.2
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 4.8e-47 191.4 112 81.2
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.8e-47 191.4 112 82.1
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 6.2e-47 191.0 112 80.4
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 6.2e-47 191.0 112 81.2
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 8.2e-47 190.7 112 82.1
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 8.2e-47 190.7 112 82.1
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.1e-46 190.3 113 82.3
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.1e-46 190.3 112 82.1
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.1e-46 190.3 112 79.5
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 1.1e-46 190.3 112 79.5
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 1.8e-46 189.5 112 83.9
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 1.8e-46 189.5 112 83.9
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 1.8e-46 189.5 112 79.5
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 2.4e-46 189.1 112 83.0
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 2.4e-46 189.1 112 80.4
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 3.1e-46 188.7 114 78.9
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 3.1e-46 188.7 112 78.6
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 3.1e-46 188.7 109 83.5
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 4.0e-46 188.3 112 80.4
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.2e-45 186.8 112 80.4
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.2e-45 186.8 112 79.5
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 1.2e-45 186.8 112 79.5
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.2e-45 186.8 112 82.1
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 2.0e-45 186.0 112 79.5
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 2.0e-45 186.0 112 79.5
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 2.6e-45 185.7 112 77.7
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 3.4e-45 185.3 112 76.8
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 3.4e-45 185.3 112 79.5
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.4e-45 185.3 112 79.5
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 3.4e-45 185.3 112 78.6
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 4.5e-45 184.9 112 79.5
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 4.5e-45 184.9 112 76.8
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 4.5e-45 184.9 111 79.3
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 5.8e-45 184.5 128 72.7
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 5.8e-45 184.5 112 79.5
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 7.6e-45 184.1 112 77.7
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 7.6e-45 184.1 112 81.2
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 7.6e-45 184.1 112 77.7
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 7.6e-45 184.1 112 78.6
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 1.0e-44 183.7 112 78.6
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.0e-44 183.7 125 74.4
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 1.0e-44 183.7 112 78.6
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.3e-44 183.3 112 78.6
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.3e-44 183.3 112 81.2
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.3e-44 183.3 112 76.8
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.7e-44 183.0 112 78.6
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 1.7e-44 183.0 112 77.7
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.7e-44 183.0 112 79.5
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 80.4
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 80.4
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 80.4
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 80.4
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 80.4
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 2.2e-44 182.6 115 74.8
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 81.2
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 2.2e-44 182.6 112 76.8
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 2.9e-44 182.2 112 80.4
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 2.9e-44 182.2 112 80.4
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 2.9e-44 182.2 112 80.4
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 3.8e-44 181.8 112 79.5
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 3.8e-44 181.8 112 78.6
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 4.9e-44 181.4 112 77.7
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 6.5e-44 181.0 112 79.5
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 8.4e-44 180.6 112 77.7
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 8.4e-44 180.6 111 77.5
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 8.4e-44 180.6 110 78.2
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 1.1e-43 180.3 112 79.5
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.1e-43 180.3 112 78.6
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 1.4e-43 179.9 112 77.7
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.4e-43 179.9 111 76.6
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.5e-43 179.1 112 75.9
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 5.5e-43 177.9 112 75.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 5.5e-43 177.9 112 78.6
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 7.1e-43 177.6 113 77.0
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 9.3e-43 177.2 112 76.8
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.2e-42 176.8 110 77.3
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 1.2e-42 176.8 112 77.7
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 1.2e-42 176.8 112 77.7
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.2e-42 176.8 112 79.5
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.2e-42 176.8 112 77.7
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.2e-42 176.8 112 77.7
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.6e-42 176.4 112 73.2
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 2.1e-42 176.0 113 72.6
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 2.7e-42 175.6 112 77.7
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 2.7e-42 175.6 112 75.0
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 4.6e-42 174.9 112 78.6
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 4.6e-42 174.9 112 75.9
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 7.9e-42 174.1 112 76.8
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 1.3e-41 173.3 112 76.8
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 1.3e-41 173.3 112 74.1
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 1.8e-41 172.9 112 76.8
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 1.8e-41 172.9 110 75.5
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 2.3e-41 172.6 112 75.0
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 6.7e-41 171.0 112 73.2
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.9e-40 169.5 136 65.4
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 6.3e-39 164.5 112 71.4
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 9.0e-38 160.6 107 73.8
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 9.4e-35 150.6 110 74.5
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 9.4e-35 150.6 110 74.5
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.2e-34 150.2 112 67.9
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.7e-34 149.1 87 81.6
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 7.9e-34 147.5 110 73.6
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 6.7e-33 144.4 123 56.9
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 1.1e-32 143.7 123 60.2
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.7e-32 141.4 85 80.0
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.4e-32 141.0 83 80.7
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 9.7e-32 140.6 116 62.9
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 9.7e-32 140.6 87 75.9
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 1.7e-31 139.8 83 78.3
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 1.7e-31 139.8 83 77.1
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 1.7e-31 139.8 86 79.1
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.8e-31 138.3 83 79.5
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 8.2e-31 137.5 83 75.9
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.1e-30 137.1 85 75.3
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.1e-30 137.1 205 41.0
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 1.1e-30 137.1 83 78.3
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 2.4e-30 136.0 128 59.4
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.4e-30 136.0 83 79.5
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 2.4e-30 136.0 133 53.4
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 4.1e-30 135.2 112 58.0
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 5.3e-30 134.8 112 60.7
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.2e-29 133.7 83 75.9
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 5.9e-29 131.3 83 77.1
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.3e-28 130.2 77 80.5
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 1.7e-28 129.8 86 70.9
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.1e-27 127.1 79 74.7
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.2e-27 125.2 75 80.0
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 6.1e-26 121.3 87 67.8
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 5.1e-25 118.2 161 46.0
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 4.8e-23 111.7 63 84.1
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 7.0e-22 107.8 63 79.4
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 9.1e-22 107.5 62 80.6
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.6e-21 105.9 83 67.5
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 2.6e-21 105.9 95 60.0
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 4.5e-21 105.1 63 77.8
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 7.7e-21 104.4 111 45.0
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.5e-16 90.1 82 59.8
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 2.6e-16 89.4 106 43.4
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 4.4e-16 88.6 59 69.5
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.7e-15 86.7 113 46.0
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 1.7e-15 86.7 113 39.8
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.1e-14 80.9 58 69.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.5e-13 78.6 58 67.2
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 2.9e-12 75.9 53 67.9
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.0e-09 67.4 44 70.5


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