Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 7.2e-110 400.6 204 100.0
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 4.4e-107 391.3 204 99.0
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.9e-103 378.3 204 95.6
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.5e-102 373.6 205 94.6
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.1e-100 368.6 204 92.6
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 6.8e-100 367.5 204 92.2
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.2e-98 362.5 204 91.2
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 5.6e-94 347.8 204 86.8
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 3.1e-84 315.5 201 77.6
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 6.8e-84 314.3 201 78.1
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 3.5e-80 302.0 201 75.1
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 4.6e-80 301.6 201 76.1
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 7.8e-80 300.8 201 75.1
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 3.0e-79 298.9 201 75.1
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 3.0e-79 298.9 201 75.6
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 2.5e-78 295.8 194 77.3
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 3.6e-77 292.0 201 74.1
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 4.7e-77 291.6 201 73.1
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 6.2e-77 291.2 200 73.0
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 8.1e-77 290.8 201 73.6
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.4e-76 290.0 200 74.5
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 1.4e-76 290.0 201 71.6
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.8e-76 289.7 201 73.1
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 4.0e-76 288.5 201 73.1
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 5.2e-76 288.1 201 72.1
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 1.5e-75 286.6 199 72.4
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 1.5e-75 286.6 200 72.5
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.8e-75 284.6 201 72.6
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 5.8e-75 284.6 199 72.4
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 7.6e-75 284.3 239 67.4
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 1.3e-74 283.5 199 71.4
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 2.9e-74 282.3 201 72.1
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 2.9e-74 282.3 199 71.9
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 8.4e-74 280.8 201 71.6
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 1.1e-73 280.4 201 71.1
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 1.4e-73 280.0 199 70.4
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 1.4e-73 280.0 201 70.6
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.9e-73 279.6 201 70.1
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 2.4e-73 279.3 201 71.6
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 3.2e-73 278.9 201 70.6
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 4.2e-73 278.5 199 70.9
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 5.4e-73 278.1 201 70.1
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 5.4e-73 278.1 201 69.7
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 7.1e-73 277.7 201 70.1
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 7.1e-73 277.7 201 68.7
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 7.1e-73 277.7 201 68.7
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 7.1e-73 277.7 201 69.7
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 9.3e-73 277.3 201 68.7
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 1.2e-72 276.9 201 70.6
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 1.6e-72 276.6 201 69.7
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 1.6e-72 276.6 201 72.1
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 1.6e-72 276.6 199 68.8
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 2.1e-72 276.2 194 72.2
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 2.1e-72 276.2 199 70.9
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 2.1e-72 276.2 199 70.9
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 2.7e-72 275.8 194 71.6
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 2.7e-72 275.8 194 71.6
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 2.7e-72 275.8 199 68.8
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 2.7e-72 275.8 192 75.0
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 3.5e-72 275.4 194 71.6
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 3.5e-72 275.4 201 69.2
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 4.6e-72 275.0 190 73.2
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 6.0e-72 274.6 201 68.2
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 6.0e-72 274.6 201 68.2
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 7.8e-72 274.2 201 68.7
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 7.8e-72 274.2 201 68.2
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 7.8e-72 274.2 201 68.7
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 1.0e-71 273.9 199 69.3
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 1.3e-71 273.5 201 68.7
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.3e-71 273.5 199 68.3
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 1.3e-71 273.5 195 72.8
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 1.7e-71 273.1 201 67.7
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 2.3e-71 272.7 198 68.2
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 2.3e-71 272.7 201 68.7
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 3.9e-71 271.9 195 70.3
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 3.9e-71 271.9 201 69.2
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.1e-71 271.6 200 71.5
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.5e-70 270.0 199 71.4
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 1.9e-70 269.6 192 70.8
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 2.5e-70 269.2 211 66.4
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 4.3e-70 268.5 199 68.3
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 7.3e-70 267.7 195 70.3
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 1.6e-69 266.5 201 66.2
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.6e-69 266.5 204 67.2
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 1.6e-69 266.5 201 67.2
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 6.2e-69 264.6 201 68.7
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 1.1e-68 263.8 201 67.2
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.4e-68 263.5 183 72.7
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 1.4e-68 263.5 198 65.7
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 2.4e-68 262.7 198 65.2
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 2.4e-68 262.7 194 69.6
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 3.1e-68 262.3 199 68.3
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 9.0e-68 260.8 194 69.1
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 2.6e-67 259.2 198 65.2
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.4e-67 258.8 182 72.5
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 3.4e-67 258.8 206 67.5
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 5.8e-67 258.1 201 65.7
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 2.2e-66 256.1 201 64.7
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 4.9e-66 255.0 201 65.2
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 1.4e-65 253.4 204 63.2
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 1.9e-65 253.1 194 67.0
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.4e-65 252.7 178 71.9
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 4.2e-65 251.9 174 70.1
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 1.2e-64 250.4 199 63.3
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 3.5e-64 248.8 201 64.2
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 1.0e-63 247.3 197 66.5
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 1.3e-63 246.9 185 69.2
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 4.3e-62 241.9 182 68.7
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 5.6e-62 241.5 199 62.3
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 7.4e-62 241.1 180 69.4
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 2.4e-60 236.1 196 64.3
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 6.9e-60 234.6 186 64.0
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 3.4e-59 232.3 167 71.9
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 7.6e-59 231.1 194 59.8
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.7e-58 229.9 330 43.6
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 1.4e-57 226.9 221 57.0
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 4.2e-57 225.3 199 59.3
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.6e-56 223.4 200 59.0
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 3.3e-54 215.7 167 65.9
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 5.6e-54 214.9 220 55.5
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.6e-53 213.4 254 50.0
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 3.7e-53 212.2 238 54.2
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 3.3e-46 189.1 193 51.8
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 1.3e-45 187.2 229 49.3
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 6.3e-45 184.9 192 49.0
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 3.4e-43 179.1 129 73.6
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 5.5e-41 171.8 201 49.8
CBR_g17957 Chara braunii HOM05D004366 ORTHO05D005058 1.2e-40 170.6 195 47.7
Dinv16634 Davidia involucrata HOM05D004366 ORTHO05D005058 3.6e-40 169.1 113 75.2
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 3.0e-39 166.0 117 68.4
TAR629G2773 Trochodendron aralioides HOM05D004366 ORTHO05D005058 1.1e-38 164.1 113 72.6
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.7e-34 150.2 116 67.2
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.2e-34 149.8 147 53.7
MD11G1061500 Malus domestica HOM05D004366 ORTHO05D005058 4.2e-33 145.6 113 65.5
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 7.2e-33 144.8 174 44.8
Mapoly0113s0045 Marchantia polymorpha HOM05D004366 ORTHO05D005058 9.7e-30 134.4 205 39.0
arahy.Tifrunner.gnm1.ann1.MY0RSE Arachis hypogaea HOM05D004366 ORTHO05D005058 1.1e-28 131.0 104 65.4
FAN07G2952 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.4e-28 130.6 75 84.0
Potri.019G023800 Populus trichocarpa HOM05D004366 ORTHO05D005058 4.1e-28 129.0 95 64.2
MSTRG.695 Avicennia marina HOM05D004366 ORTHO05D005058 6.5e-26 121.7 86 68.6
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 8.5e-26 121.3 127 52.0
CSS0042124 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.4e-25 120.6 82 73.2
CSS0000370 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 9.4e-25 117.9 82 70.7
arahy.Tifrunner.gnm1.ann1.J913Y5 Arachis hypogaea HOM05D004366 ORTHO05D005058 3.6e-24 115.9 85 67.1
MCO13G325 Micromonas commoda HOM05D004366 ORTHO05D005058 3.3e-22 109.4 202 37.6
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 5.7e-22 108.6 87 62.1
arahy.Tifrunner.gnm1.ann1.8CQ436 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.8e-20 103.6 68 75.0
arahy.Tifrunner.gnm1.ann1.N9R1JE Arachis hypogaea HOM05D004366 ORTHO05D005058 2.4e-20 103.2 77 67.5
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 7.0e-20 101.7 99 55.6
Rhsim11G0057700 Rhododendron simsii HOM05D004366 ORTHO05D005058 2.6e-19 99.8 72 69.4
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 3.5e-19 99.4 70 68.6
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 3.5e-19 99.4 130 46.9
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 5.0e-18 95.5 100 52.0
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 6.5e-18 95.1 75 65.3
PRCOL_00002884 Prasinoderma coloniale HOM05D004366 ORTHO05D005058 3.2e-17 92.8 200 31.0
Cre05.g244850 Chlamydomonas reinhardtii HOM05D004366 ORTHO05D005058 4.0e-15 85.9 192 33.9
arahy.Tifrunner.gnm1.ann1.NKT7G2 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.5e-14 81.6 115 45.2
CANSAT54G0841 Cannabis sativa HOM05D001400 ORTHO05D001795 7.5e-14 81.6 76 55.3
Lsat_1_v5_gn_1_103541 Lactuca sativa HOM05D004366 ORTHO05D005058 9.7e-14 81.3 103 45.6
SalBow1G5797 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.6e-11 73.9 44 75.0
AUR62028525 Chenopodium quinoa HOM05D004366 ORTHO05D000022 7.2e-09 65.1 47 63.8
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 1.2e-08 64.3 70 47.1
RcHm_v2.0_Chr1g0352451 Rosa chinensis HOM05D004366 ORTHO05D005058 6.8e-07 58.5 36 80.6
BraA08t32473Z Brassica rapa HOM05D004366 ORTHO05D005058 1.5e-06 57.4 40 65.0
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 2.6e-06 56.6 42 66.7


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