Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 7.7e-86 320.5 165 100.0
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 9.8e-81 303.5 161 97.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.3e-80 303.1 161 96.9
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.8e-80 302.0 161 96.9
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.2e-73 280.0 161 88.8
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.1e-63 246.9 159 79.2
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 5.4e-63 244.6 161 79.5
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 2.0e-62 242.7 161 78.9
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.0e-58 230.3 160 75.0
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 6.8e-58 227.6 159 71.1
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 8.9e-58 227.3 161 71.4
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.4e-57 224.9 161 65.8
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 7.5e-57 224.2 158 68.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 2.2e-56 222.6 157 70.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 4.9e-56 221.5 159 67.3
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.1e-55 220.3 159 69.2
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.9e-55 219.5 159 67.9
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 2.4e-55 219.2 159 68.6
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 2.4e-55 219.2 160 66.9
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.2e-55 218.8 155 67.7
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 7.0e-55 217.6 159 68.6
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 7.0e-55 217.6 159 67.9
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 9.2e-55 217.2 159 67.3
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 9.2e-55 217.2 159 67.3
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.2e-54 216.9 159 66.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.0e-54 216.1 159 66.0
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.7e-54 215.7 154 67.5
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.7e-54 215.7 160 68.1
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 3.5e-54 215.3 159 67.3
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 7.8e-54 214.2 159 67.3
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.3e-53 213.4 161 65.8
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.7e-53 213.0 159 65.4
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.7e-53 213.0 158 67.1
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 1.7e-53 213.0 157 66.2
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 3.0e-53 212.2 165 66.7
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 3.0e-53 212.2 162 65.4
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 3.9e-53 211.8 159 67.3
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 5.0e-53 211.5 158 62.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 6.6e-53 211.1 158 65.2
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 6.6e-53 211.1 161 66.5
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 8.6e-53 210.7 158 66.5
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.1e-52 210.3 159 69.2
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.9e-52 209.5 162 66.0
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.5e-52 209.1 153 67.3
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.3e-52 208.8 154 66.9
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 3.3e-52 208.8 159 67.3
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 3.3e-52 208.8 159 67.3
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.3e-52 208.8 159 64.2
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 3.3e-52 208.8 159 64.2
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 4.3e-52 208.4 159 66.0
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 4.3e-52 208.4 162 65.4
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.2e-51 206.8 154 66.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.2e-51 206.8 155 65.2
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.6e-51 206.5 159 67.9
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.6e-51 206.5 159 64.8
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 2.1e-51 206.1 155 66.5
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 2.8e-51 205.7 164 64.6
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 3.6e-51 205.3 158 63.3
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 3.6e-51 205.3 178 61.2
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 8.1e-51 204.1 155 67.1
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 8.1e-51 204.1 158 63.9
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 8.1e-51 204.1 158 62.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.1e-50 203.8 162 64.8
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.1e-50 203.8 166 64.5
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.1e-50 203.8 165 64.8
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.4e-50 203.4 159 64.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.4e-50 203.4 160 62.5
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.4e-50 203.4 158 62.7
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 1.8e-50 203.0 161 65.2
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.8e-50 203.0 155 66.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.8e-50 203.0 158 62.7
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.8e-50 203.0 156 62.8
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.3e-50 202.6 159 63.5
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.3e-50 202.6 163 59.5
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 4.0e-50 201.8 163 58.9
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 5.2e-50 201.4 159 64.2
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 5.2e-50 201.4 157 65.6
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 6.8e-50 201.1 172 58.7
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.5e-49 199.9 161 63.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 2.6e-49 199.1 172 58.1
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.8e-49 198.0 162 63.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 5.8e-49 198.0 158 61.4
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 7.5e-49 197.6 159 62.3
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 9.8e-49 197.2 173 57.8
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 9.8e-49 197.2 160 61.9
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 9.8e-49 197.2 158 65.2
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.7e-48 196.4 163 61.3
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.7e-48 196.4 162 63.0
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.7e-48 196.4 174 57.5
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 4.9e-48 194.9 158 58.2
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 4.9e-48 194.9 176 58.5
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.3e-48 194.1 156 63.5
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.1e-47 193.7 158 61.4
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.1e-47 193.7 159 63.5
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.4e-47 192.6 157 61.8
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.7e-46 189.1 161 60.9
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.8e-46 187.6 166 59.0
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.8e-46 187.6 166 59.0
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 6.8e-42 174.5 176 55.1
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.3e-37 160.2 159 51.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 4.3e-36 155.2 128 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 3.6e-35 152.1 152 48.0
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 4.0e-34 148.7 154 50.0
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.8e-32 142.1 126 57.1
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 6.0e-30 134.8 159 47.2
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 2.8e-27 125.9 111 53.2
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 2.4e-26 122.9 159 46.5
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 6.9e-26 121.3 165 43.6
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.4e-23 113.6 163 44.2
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 6.7e-21 104.8 144 41.7
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.1e-19 99.8 162 39.5
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 3.1e-18 95.9 161 40.4
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.4e-15 87.0 57 71.9
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.0e-09 66.6 78 48.7
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.6e-06 57.0 53 60.4


User provided reference genes

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