Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 6.7e-60 233.8 117 100.0
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 4.2e-46 188.0 116 84.5
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.8e-31 138.3 116 65.5
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.3e-26 123.2 122 59.8
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.2e-24 116.7 117 56.4
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.5e-24 115.2 121 54.5
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 3.5e-24 115.2 108 59.3
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 3.5e-24 115.2 119 55.5
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 6.0e-24 114.4 122 54.9
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.0e-23 113.6 119 55.5
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.0e-23 113.6 121 55.4
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.3e-23 113.2 109 57.8
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 3.0e-23 112.1 107 58.9
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 3.9e-23 111.7 112 54.5
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 3.9e-23 111.7 106 60.4
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 3.9e-23 111.7 109 54.1
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.1e-22 110.2 107 57.9
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.5e-22 109.8 105 56.2
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.5e-22 109.8 106 58.5
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.9e-22 109.4 126 50.0
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.9e-22 109.4 105 60.0
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 1.9e-22 109.4 109 56.9
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 3.3e-22 108.6 126 50.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 3.3e-22 108.6 116 53.4
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 5.6e-22 107.8 105 59.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 5.6e-22 107.8 126 51.6
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 9.5e-22 107.1 115 53.9
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.2e-21 106.7 118 54.2
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.6e-21 106.3 109 56.9
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 4.7e-21 104.8 110 50.9
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.1e-20 103.6 105 54.3
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 1.8e-20 102.8 121 52.1
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.8e-20 102.8 108 57.4
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 2.3e-20 102.4 107 55.1
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.1e-20 102.1 101 58.4
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 5.2e-20 101.3 106 54.7
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 5.2e-20 101.3 116 49.1
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.2e-19 100.1 104 51.9
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.2e-19 100.1 48 100.0
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.5e-19 99.8 119 50.4
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 2.0e-19 99.4 120 48.3
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 2.6e-19 99.0 117 52.1
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 3.4e-19 98.6 105 51.4
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 5.8e-19 97.8 105 49.5
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 5.8e-19 97.8 104 53.8
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 9.8e-19 97.1 105 51.4
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 9.8e-19 97.1 116 51.7
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.2e-18 95.9 105 51.4
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 4.9e-18 94.7 121 47.9
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 8.3e-18 94.0 108 51.9
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 1.1e-17 93.6 93 54.8
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.4e-17 93.2 123 45.5
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.4e-17 93.2 127 46.5
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 2.4e-17 92.4 108 49.1
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 2.4e-17 92.4 100 53.0
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 2.4e-17 92.4 102 50.0
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 2.4e-17 92.4 126 47.6
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 3.2e-17 92.0 106 50.9
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 4.1e-17 91.7 122 45.9
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 5.4e-17 91.3 122 47.5
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 7.0e-17 90.9 125 46.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.2e-16 90.1 117 47.0
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.2e-16 90.1 129 45.7
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.6e-16 89.7 122 47.5
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 2.1e-16 89.4 121 43.0
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 3.5e-16 88.6 128 43.8
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 3.5e-16 88.6 103 48.5
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 4.6e-16 88.2 64 70.3
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 1.3e-15 86.7 72 62.5
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 2.3e-15 85.9 100 50.0
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 6.6e-15 84.3 105 48.6
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.1e-14 83.6 107 45.8
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.1e-14 83.6 97 49.5
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.5e-14 82.4 106 43.4
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 7.3e-14 80.9 95 49.5
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 8.1e-13 77.4 97 49.5
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 2.3e-12 75.9 126 39.7
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.3e-12 75.9 87 47.1
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 3.1e-12 75.5 121 42.1
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 6.8e-12 74.3 102 44.1
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 8.9e-12 73.9 97 48.5
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.6e-11 72.4 51 72.5
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 3.4e-11 72.0 88 46.6
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 5.8e-11 71.2 106 42.5
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.3e-10 70.1 106 42.5
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.3e-10 70.1 121 38.8
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 2.2e-10 69.3 91 49.5
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 2.9e-10 68.9 112 42.9
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 4.9e-10 68.2 96 42.7
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.1e-09 67.0 107 42.1
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.9e-09 66.2 102 38.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.4e-09 65.9 109 35.8
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 7.8e-08 60.8 97 41.2
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 3.9e-07 58.5 114 36.8
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.1e-06 57.0 80 47.5
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.5e-06 56.6 111 35.1
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 4.3e-06 55.1 56 53.6


User provided reference genes

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