Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g12641 Fragaria vesca HOM05D000003 ORTHO05D000022 7.1e-133 477.2 239 100.0
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-43 180.6 152 66.4
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 7.8e-39 164.9 137 65.7
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-26 124.4 92 67.4
FvH4_5g32912 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-24 117.1 101 63.4
FvH4_2g12622 Fragaria vesca HOM05D012422 ORTHO05D012874 1.2e-23 114.4 99 63.6
FAN25G0905 Fragaria x ananassa HOM05D012422 ORTHO05D012874 1.3e-22 110.9 130 52.3
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 1.8e-22 110.5 92 60.9
FAN25G1632 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.5e-21 106.7 111 56.8
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 3.7e-20 102.8 162 41.4
FvH4_5g30301 Fragaria vesca HOM05D000003 ORTHO05D000022 2.0e-18 97.1 105 50.5
FvH4_6g21812 Fragaria vesca HOM05D012422 ORTHO05D000167 2.0e-18 97.1 86 57.0
FvH4_6g42230 Fragaria vesca HOM05D000003 ORTHO05D000022 2.0e-18 97.1 144 41.7
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 4.5e-18 95.9 163 39.3
FvH4_6g25081 Fragaria vesca HOM05D000003 ORTHO05D000022 5.8e-18 95.5 92 55.4
FvH4_3g37001 Fragaria vesca HOM05D000003 ORTHO05D000006 1.0e-17 94.7 90 57.8
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 1.3e-17 94.4 90 53.3
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 3.2e-16 89.7 92 48.9
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 4.2e-16 89.4 92 48.9
RcHm_v2.0_Chr4g0393821 Rosa chinensis HOM05D000003 ORTHO05D000022 1.2e-15 87.8 93 50.5
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 1.6e-15 87.4 91 51.6
FvH4_3g19950 Fragaria vesca HOM05D002732 ORTHO05D002955 4.6e-15 85.9 96 49.0
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 1.0e-14 84.7 89 53.9
FvH4_6g34981 Fragaria vesca HOM05D000003 ORTHO05D000022 1.3e-14 84.3 197 32.0
FvH4_4g17203 Fragaria vesca HOM05D000003 ORTHO05D000022 1.8e-14 84.0 92 52.2
FvH4_4g13392 Fragaria vesca HOM05D000003 ORTHO05D000022 2.3e-14 83.6 92 47.8
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 3.0e-14 83.2 92 50.0
FvH4_4g30261 Fragaria vesca HOM05D000003 ORTHO05D000006 3.0e-14 83.2 83 51.8
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 5.1e-14 82.4 92 45.7
FvH4_3g14411 Fragaria vesca HOM05D000003 ORTHO05D000022 6.7e-14 82.0 92 50.0
FvH4_5g24522 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-13 81.3 83 49.4
FvH4_1g18562 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-13 80.9 90 46.7
FvH4_5g16792 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-13 80.9 81 49.4
FvH4_5g30341 Fragaria vesca HOM05D000003 ORTHO05D000022 2.5e-13 80.1 92 45.7
FvH4_2g33371 Fragaria vesca HOM05D000003 ORTHO05D000022 3.3e-13 79.7 92 45.7
FvH4_2g17721 Fragaria vesca HOM05D000003 ORTHO05D000022 4.3e-13 79.3 84 47.6
FvH4_6g27511 Fragaria vesca HOM05D015180 ORTHO05D016296 9.7e-13 78.2 81 51.9
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 2.2e-12 77.0 92 45.7
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 6.3e-12 75.5 92 45.7
RcHm_v2.0_Chr1g0334811 Rosa chinensis HOM05D000003 ORTHO05D000022 8.2e-12 75.1 84 47.6
RcHm_v2.0_Chr1g0374401 Rosa chinensis HOM05D000106 ORTHO05D010272 8.2e-12 75.1 92 44.6
FvH4_6g18361 Fragaria vesca HOM05D000003 ORTHO05D000022 1.8e-11 73.9 89 47.2
Prupe.8G128400 Prunus persica HOM05D018000 ORTHO05D017022 5.3e-11 72.4 95 37.9
FvH4_5g19160 Fragaria vesca HOM05D000003 ORTHO05D025552 6.9e-11 72.0 90 43.3
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 6.9e-11 72.0 90 43.3
Prupe.1G509200 Prunus persica HOM05D000003 ORTHO05D000022 1.2e-10 71.2 103 37.9
FvH4_5g34871 Fragaria vesca HOM05D012422 ORTHO05D012874 2.0e-10 70.5 106 38.7
FvH4_3g28252 Fragaria vesca HOM05D000003 ORTHO05D000022 3.4e-10 69.7 57 57.9
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 4.5e-10 69.3 91 38.5
FvH4_3g18961 Fragaria vesca HOM05D000003 ORTHO05D000004 7.7e-10 68.6 72 50.0
FvH4_3g24081 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-09 68.2 92 37.0
FvH4_2g00771 Fragaria vesca HOM05D000003 ORTHO05D000022 1.7e-09 67.4 92 37.0
FAN20G0282 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.7e-09 67.4 63 54.0
Hund03119 Selenicereus undatus HOM05D000003 ORTHO05D050926 2.2e-09 67.0 82 36.6
Prupe.6G185900 Prunus persica HOM05D000003 ORTHO05D000022 5.0e-09 65.9 89 43.8
FvH4_4g02991 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-08 64.7 54 57.4
FvH4_6g20891 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-08 64.7 181 27.6
FvH4_6g22181 Fragaria vesca HOM05D012422 ORTHO05D012874 1.4e-08 64.3 96 37.5
FAN14G3980 Fragaria x ananassa HOM05D012422 ORTHO05D012874 1.4e-08 64.3 96 37.5
FAN10G3451 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.9e-08 63.9 89 39.3
Hund07702 Selenicereus undatus HOM05D001688 ORTHO05D001571 1.9e-08 63.9 86 33.7
FvH4_6g18903 Fragaria vesca HOM05D000003 ORTHO05D000022 2.5e-08 63.5 57 52.6
Prupe.1G168800 Prunus persica HOM05D000003 ORTHO05D000022 2.5e-08 63.5 97 37.1
Hund22573 Selenicereus undatus HOM05D000003 ORTHO05D000022 5.5e-08 62.4 95 37.9
FAN12G0048 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.6e-07 60.8 76 44.7
FAN18G3905 Fragaria x ananassa HOM05D000003 ORTHO05D000022 2.1e-07 60.5 89 42.7
RcHm_v2.0_Chr3g0495871 Rosa chinensis HOM05D000003 ORTHO05D000022 2.1e-07 60.5 55 54.5
FvH4_1g22511 Fragaria vesca HOM05D000003 ORTHO05D000022 2.7e-07 60.1 108 36.1
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 2.7e-07 60.1 95 40.0
FvH4_5g27791 Fragaria vesca HOM05D000003 ORTHO05D000022 6.1e-07 58.9 66 45.5
FvH4_6g09141 Fragaria vesca HOM05D012422 ORTHO05D012874 6.1e-07 58.9 47 59.6
FAN11G3261 Fragaria x ananassa HOM05D012422 ORTHO05D012874 6.1e-07 58.9 51 54.9
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 6.1e-07 58.9 125 34.4
FAN19G1700 Fragaria x ananassa HOM05D000003 ORTHO05D000022 1.0e-06 58.2 57 50.9
RcHm_v2.0_Chr7g0218671 Rosa chinensis HOM05D000003 ORTHO05D000022 1.0e-06 58.2 84 34.5
FvH4_6g33631 Fragaria vesca HOM05D000003 ORTHO05D004145 1.8e-06 57.4 110 38.2
FvH4_4g03801 Fragaria vesca HOM05D000003 ORTHO05D000022 2.3e-06 57.0 68 47.1
Prupe.2G022700 Prunus persica HOM05D008133 ORTHO05D009449 3.0e-06 56.6 81 42.0
FvH4_2g32021 Fragaria vesca HOM05D000003 ORTHO05D000022 3.9e-06 56.2 92 38.0
FvH4_3g33131 Fragaria vesca HOM05D000003 ORTHO05D000022 3.9e-06 56.2 66 39.4
FvH4_6g21761 Fragaria vesca HOM05D062033 ORTHO05D045489 3.9e-06 56.2 89 41.6
FAN16G3309 Fragaria x ananassa HOM05D012422 ORTHO05D012874 3.9e-06 56.2 48 56.2
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-06 56.2 80 38.8
FAN21G0109 Fragaria x ananassa HOM05D010151 ORTHO05D000022 5.1e-06 55.8 69 40.6
Peaxi162Scf00537g00047 Petunia axillaris HOM05D000155 ORTHO05D000022 5.1e-06 55.8 85 38.8
BolC8t52842H Brassica oleracea HOM05D000003 ORTHO05D000925 6.7e-06 55.5 150 23.3
FvH4_6g31361 Fragaria vesca HOM05D010151 ORTHO05D000022 6.7e-06 55.5 66 37.9
FAN03G2427 Fragaria x ananassa HOM05D000003 ORTHO05D000022 6.7e-06 55.5 60 51.7
Nitab4.5_0002482g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.8e-06 55.1 88 40.9


User provided reference genes

Program Settings