Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.5e-144 516.2 258 100.0
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.5e-115 419.9 272 80.5
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.7e-108 396.4 248 82.7
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.3e-92 343.6 226 75.2
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.2e-85 320.5 229 68.6
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.4e-81 306.2 255 62.0
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 2.9e-79 299.3 228 65.4
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 3.8e-79 298.9 214 69.2
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.9e-78 296.6 214 69.2
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.1e-77 293.1 227 62.6
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.1e-77 293.1 226 61.9
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 3.5e-77 292.4 221 64.7
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 4.6e-77 292.0 214 67.3
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.7e-76 290.0 178 80.3
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 5.1e-76 288.5 237 62.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.5e-75 287.0 211 66.8
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.5e-75 287.0 229 62.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.9e-75 286.6 223 63.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.5e-75 286.2 247 57.1
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 7.3e-75 284.6 210 66.2
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 7.3e-75 284.6 210 66.2
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.3e-74 283.9 208 65.4
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.8e-74 282.0 202 68.3
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.4e-73 280.4 223 59.6
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.1e-73 279.3 230 60.4
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 4.0e-73 278.9 224 60.3
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.2e-72 277.3 214 64.0
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.5e-72 276.9 209 63.6
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 5.8e-72 275.0 231 59.7
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.8e-72 275.0 220 59.5
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 7.6e-72 274.6 214 61.2
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.3e-71 273.9 209 64.1
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.3e-71 273.9 207 62.3
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 3.8e-71 272.3 225 59.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 3.8e-71 272.3 213 62.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 4.9e-71 271.9 220 59.5
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 6.4e-71 271.6 225 59.1
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 6.4e-71 271.6 216 60.6
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.1e-70 270.8 211 63.0
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 2.4e-70 269.6 210 61.9
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 3.2e-70 269.2 263 51.3
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 4.2e-70 268.9 222 58.6
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 4.2e-70 268.9 211 59.7
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 5.4e-70 268.5 213 59.2
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 7.1e-70 268.1 225 59.1
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 7.1e-70 268.1 218 58.3
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 7.1e-70 268.1 194 67.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 7.1e-70 268.1 213 61.0
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.1e-70 268.1 205 63.4
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 9.3e-70 267.7 201 62.2
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 9.3e-70 267.7 263 51.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.6e-69 266.9 217 59.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.6e-69 266.9 216 60.6
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 3.5e-69 265.8 236 55.5
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.6e-69 265.4 263 51.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 7.9e-69 264.6 256 55.1
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.0e-68 264.2 206 59.2
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.3e-68 263.1 202 62.9
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 3.0e-68 262.7 209 59.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.5e-67 260.4 235 56.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.9e-67 260.0 225 56.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 7.3e-67 258.1 206 57.3
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.6e-66 256.9 236 53.4
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 6.2e-66 255.0 211 56.9
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 8.1e-66 254.6 210 55.2
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.0e-64 250.0 181 66.9
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 3.4e-64 249.2 205 55.6
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.9e-63 246.1 206 58.3
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.8e-63 245.7 228 54.4
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 6.4e-63 245.0 230 51.7
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.6e-61 240.4 237 55.3
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 7.9e-61 238.0 212 53.8
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 5.1e-60 235.3 205 57.6
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 5.1e-60 235.3 173 68.2
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 5.1e-60 235.3 188 63.3
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.9e-59 233.4 181 61.9
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.5e-59 233.0 183 61.7
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 8.1e-58 228.0 204 55.9
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 4.0e-57 225.7 211 53.1
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 3.8e-55 219.2 214 54.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.5e-51 206.5 261 44.4
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 5.7e-51 205.3 188 59.0
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 6.3e-50 201.8 207 47.3
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.4e-48 196.1 140 67.9
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 7.6e-48 194.9 185 49.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.8e-47 192.6 198 49.5
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 6.5e-47 191.8 111 91.0
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.9e-46 190.3 202 43.6
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 5.5e-46 188.7 272 40.8
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 3.3e-43 179.5 230 42.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 3.8e-39 166.0 140 55.7
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 8.2e-34 148.3 210 43.8
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 2.2e-31 140.2 211 37.0
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 7.2e-30 135.2 110 55.5
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 9.7e-27 124.8 145 42.8
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 3.7e-26 122.9 166 41.6
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 5.3e-25 119.0 104 53.8
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 2.2e-23 113.6 209 37.3
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 6.1e-21 105.5 75 62.7
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 2.2e-18 97.1 80 58.8
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 9.1e-17 91.7 104 50.0
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 3.0e-12 76.6 196 26.5
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.4e-09 67.0 78 41.0
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 9.4e-06 55.1 53 47.2


User provided reference genes

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