Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 1.3e-154 549.7 271 100.0
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 3.4e-54 216.1 136 81.6
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 6.3e-53 211.8 136 80.9
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 2.7e-51 206.5 136 80.1
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.5e-51 205.7 101 100.0
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 5.9e-51 205.3 136 80.9
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.0e-47 193.0 136 71.3
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 4.0e-47 192.6 136 74.3
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 2.6e-46 189.9 136 71.3
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 5.8e-46 188.7 136 71.3
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 1.7e-45 187.2 136 72.1
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.7e-45 187.2 136 71.3
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 2.2e-45 186.8 136 70.6
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 2.2e-45 186.8 136 74.3
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 4.9e-45 185.7 136 69.1
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 4.9e-45 185.7 136 69.1
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 8.3e-45 184.9 143 64.3
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 8.3e-45 184.9 136 68.4
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 8.3e-45 184.9 136 66.9
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 8.3e-45 184.9 136 69.1
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.1e-44 184.5 136 68.4
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.1e-44 184.5 136 68.4
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.1e-44 184.5 136 69.1
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.4e-44 183.3 136 67.6
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.4e-44 183.3 136 67.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.4e-44 183.3 135 67.4
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.2e-44 183.0 136 68.4
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 3.2e-44 183.0 135 68.1
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 4.1e-44 182.6 135 68.1
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 7.0e-44 181.8 135 66.7
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 9.2e-44 181.4 136 67.6
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 9.2e-44 181.4 136 66.9
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 9.2e-44 181.4 135 66.7
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 9.2e-44 181.4 136 69.1
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.2e-43 181.0 136 66.2
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-43 181.0 135 65.9
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.2e-43 181.0 136 66.9
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.2e-43 181.0 136 69.9
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.6e-43 180.6 136 67.6
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 1.6e-43 180.6 136 67.6
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 1.6e-43 180.6 136 64.7
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.6e-43 180.6 136 66.2
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 2.0e-43 180.3 136 66.2
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.0e-43 180.3 168 58.3
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.0e-43 180.3 136 69.9
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.7e-43 179.9 136 68.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.7e-43 179.9 136 66.9
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 2.7e-43 179.9 136 66.2
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 2.7e-43 179.9 136 65.4
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.7e-43 179.9 136 66.9
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 6.0e-43 178.7 137 65.7
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 6.0e-43 178.7 136 65.4
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.8e-43 178.3 136 66.2
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.3e-42 177.6 136 66.9
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.3e-42 177.6 136 66.2
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.3e-42 177.6 136 67.6
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.7e-42 177.2 136 64.7
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 3.0e-42 176.4 138 63.0
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 3.0e-42 176.4 136 64.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 3.9e-42 176.0 136 65.4
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 5.0e-42 175.6 135 67.4
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 5.0e-42 175.6 136 63.2
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 6.6e-42 175.3 136 64.0
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 6.6e-42 175.3 136 64.7
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 8.6e-42 174.9 136 63.2
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.1e-41 174.5 136 63.2
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.5e-41 174.1 136 63.2
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.9e-41 173.7 136 66.9
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.9e-41 173.7 136 66.9
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.5e-41 173.3 135 63.7
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.5e-41 173.3 136 66.2
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.5e-41 173.3 136 66.2
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.3e-41 172.9 136 64.0
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.3e-41 172.9 136 64.0
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.3e-41 172.9 136 64.0
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 4.3e-41 172.6 136 64.0
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 4.3e-41 172.6 136 64.0
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 5.6e-41 172.2 136 62.5
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 5.6e-41 172.2 136 62.5
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 7.3e-41 171.8 136 63.2
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.3e-41 171.8 156 60.9
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 9.5e-41 171.4 136 64.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.5e-41 171.4 135 66.7
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.2e-40 171.0 156 60.9
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 3.6e-40 169.5 136 62.5
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 4.7e-40 169.1 136 66.2
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 6.2e-40 168.7 135 63.7
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 8.0e-40 168.3 136 63.2
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 8.0e-40 168.3 132 63.6
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.8e-39 167.2 141 65.2
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.8e-39 167.2 150 59.3
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.0e-39 166.0 136 62.5
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.2e-38 164.5 136 63.2
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-38 164.5 136 61.8
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.2e-38 164.5 173 51.4
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.6e-38 163.3 150 58.7
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 3.4e-38 162.9 136 61.8
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 9.8e-38 161.4 136 62.5
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.3e-37 161.0 138 59.4
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 2.2e-37 160.2 101 74.3
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 3.2e-36 156.4 97 78.4
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.7e-35 153.3 101 71.3
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 2.7e-35 153.3 101 71.3
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 7.8e-35 151.8 106 75.5
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.3e-34 150.2 135 57.8
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 5.6e-33 145.6 77 94.8
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 2.8e-32 143.3 137 55.5
FAN14G0250 Fragaria x ananassa HOM05D027595 ORTHO05D045540 3.1e-31 139.8 71 98.6
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 8.9e-31 138.3 138 51.4
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.6e-30 136.7 136 51.5
FvH4_6g19041 Fragaria vesca HOM05D027595 ORTHO05D045540 3.4e-30 136.3 70 97.1
FvH4_5g26610 Fragaria vesca HOM05D000370 ORTHO05D001335 5.8e-30 135.6 72 95.8
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 1.7e-29 134.0 136 53.7
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 4.1e-28 129.4 73 84.9
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.5e-25 120.2 135 48.9
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 3.3e-25 119.8 105 59.0
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.3e-25 119.8 137 48.2
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.3e-25 119.4 135 47.4
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-24 117.1 135 45.2
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-24 116.3 135 47.4
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.4e-23 114.4 135 47.4
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-23 114.4 135 48.1
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-23 114.4 137 47.4
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-23 114.4 135 45.9
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-23 114.0 135 43.7
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-23 114.0 135 44.4
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-23 112.8 137 46.0
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 6.8e-23 112.1 106 55.7
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 6.8e-23 112.1 137 46.0
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-22 109.8 135 45.9
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-22 109.8 135 45.9
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 5.8e-22 109.0 137 45.3
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 2.9e-21 106.7 136 45.6
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-20 103.2 135 43.7
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 7.1e-20 102.1 98 48.0
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-19 99.0 101 46.5
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-18 97.4 135 42.2
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.1e-18 95.9 135 42.2
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-16 90.5 135 41.5
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.5e-09 67.8 135 34.1
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.5e-06 57.8 29 86.2
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 3.4e-06 56.6 168 29.2


User provided reference genes

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