Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 4.7e-123 444.5 217 100.0
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 5.7e-97 357.8 226 81.9
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 9.2e-95 350.5 226 79.6
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 1.6e-91 339.7 226 76.5
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 1.4e-90 336.7 226 75.2
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 3.4e-89 332.0 226 75.2
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 4.4e-89 331.6 246 70.3
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 1.7e-88 329.7 226 73.5
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 4.9e-88 328.2 229 76.9
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 9.2e-87 323.9 246 68.7
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 4.6e-86 321.6 226 72.1
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 3.9e-85 318.5 226 70.4
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 8.6e-85 317.4 226 71.2
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 8.6e-85 317.4 226 71.2
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 1.1e-84 317.0 226 71.2
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 2.5e-84 315.8 226 70.4
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 9.5e-84 313.9 226 70.8
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 9.5e-84 313.9 226 70.4
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.2e-83 313.5 226 70.8
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 1.2e-83 313.5 226 70.8
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 1.6e-83 313.2 226 70.4
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 2.8e-83 312.4 226 70.4
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 3.6e-83 312.0 226 69.9
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 8.0e-83 310.8 226 69.5
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 1.8e-82 309.7 226 69.5
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 4.0e-82 308.5 226 70.4
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 6.8e-82 307.8 226 69.0
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 6.8e-82 307.8 226 69.5
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 6.8e-82 307.8 226 69.0
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 6.8e-82 307.8 226 67.3
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 8.9e-82 307.4 226 68.1
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 1.2e-81 307.0 229 69.0
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.2e-81 307.0 226 68.6
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 2.0e-81 306.2 226 69.0
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 2.6e-81 305.8 226 67.7
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 3.4e-81 305.4 226 68.6
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 3.4e-81 305.4 226 68.6
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 3.4e-81 305.4 226 69.5
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 3.4e-81 305.4 226 69.5
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 3.4e-81 305.4 226 67.7
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 5.8e-81 304.7 226 69.9
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 9.8e-81 303.9 226 67.7
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 9.8e-81 303.9 223 69.5
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 1.3e-80 303.5 226 68.6
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 2.9e-80 302.4 235 66.8
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 2.9e-80 302.4 226 68.6
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 6.4e-80 301.2 226 67.3
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 6.4e-80 301.2 226 68.1
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 8.3e-80 300.8 226 66.8
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 1.1e-79 300.4 226 67.7
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.4e-79 300.1 226 66.4
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 2.4e-79 299.3 226 66.4
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 3.2e-79 298.9 226 67.3
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 7.0e-79 297.7 226 65.9
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 7.0e-79 297.7 226 66.8
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 7.0e-79 297.7 226 66.8
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 9.2e-79 297.4 226 66.8
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 9.2e-79 297.4 227 65.6
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 1.6e-78 296.6 226 65.9
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 2.7e-78 295.8 226 66.4
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 3.5e-78 295.4 226 66.4
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 4.6e-78 295.0 226 65.5
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 6.0e-78 294.7 226 65.5
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.7e-77 293.1 226 65.9
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.7e-77 293.1 226 65.5
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 3.0e-77 292.4 226 65.5
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 3.0e-77 292.4 226 65.5
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 3.0e-77 292.4 226 65.0
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 6.6e-77 291.2 226 63.7
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 6.6e-77 291.2 226 65.5
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 6.6e-77 291.2 246 62.2
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 1.5e-76 290.0 223 66.4
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 1.9e-76 289.7 226 64.2
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 4.3e-76 288.5 226 65.5
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.8e-75 285.8 226 64.2
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 3.6e-75 285.4 226 64.2
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 1.4e-74 283.5 202 71.8
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 1.5e-73 280.0 272 58.1
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.9e-71 273.1 260 57.3
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 5.4e-71 271.6 226 62.4
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 7.1e-71 271.2 167 77.2
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 3.5e-70 268.9 226 61.1
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.0e-69 267.3 226 59.7
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 1.3e-69 266.9 167 76.0
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 1.7e-69 266.5 213 63.4
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 3.9e-69 265.4 226 61.1
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 5.2e-66 255.0 228 57.9
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 5.8e-65 251.5 227 57.7
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 3.8e-64 248.8 204 60.3
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 4.7e-59 231.9 254 49.2
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 6.9e-58 228.0 226 54.9
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 7.6e-57 224.6 226 50.9
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 1.3e-56 223.8 226 53.5
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.7e-56 223.4 226 49.6
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 1.7e-56 223.4 226 49.6
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 6.4e-56 221.5 230 56.1
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.3e-48 197.2 129 74.4
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 2.9e-48 196.1 205 52.7
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.6e-46 190.3 179 59.2
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 1.1e-42 177.6 255 40.0
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 7.1e-39 164.9 231 40.3
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 7.9e-38 161.4 144 59.0
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.3e-37 160.6 204 42.6
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 2.3e-37 159.8 126 65.1
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 3.1e-34 149.4 232 38.4
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 6.5e-32 141.7 143 53.8
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 4.2e-31 139.0 182 47.3
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 3.9e-29 132.5 143 52.4
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 7.4e-28 128.3 147 52.4
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 3.7e-27 125.9 171 42.7
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 2.4e-26 123.2 88 69.3
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 6.5e-24 115.2 145 50.3
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 5.1e-21 105.5 151 39.1
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.1e-15 87.8 83 56.6
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 1.8e-13 80.5 64 62.5
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 1.0e-08 64.7 83 39.8
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 1.0e-08 64.7 83 39.8
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.1e-06 57.0 27 88.9
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.1e-06 57.0 27 88.9


User provided reference genes

Program Settings