Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 100.0
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 100.0
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 98.3
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.1e-62 243.0 116 99.1
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.9e-62 242.3 118 98.3
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 3.0e-60 235.0 116 94.0
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 3.4e-59 231.5 116 91.4
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 4.9e-58 227.6 116 92.2
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 1.3e-55 219.5 116 87.1
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 3.9e-55 218.0 116 87.1
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.1e-54 216.5 116 86.2
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 2.5e-54 215.3 116 85.3
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.5e-54 215.3 116 85.3
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 7.3e-54 213.8 116 84.5
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 9.5e-54 213.4 115 86.1
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 9.5e-54 213.4 116 83.6
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.6e-53 212.6 116 86.2
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.6e-53 212.6 116 85.3
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 1.6e-53 212.6 116 83.6
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.6e-53 212.6 116 83.6
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.6e-53 212.6 116 83.6
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 2.8e-53 211.8 112 88.4
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 3.6e-53 211.5 112 87.5
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 4.7e-53 211.1 115 82.6
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 4.7e-53 211.1 116 83.6
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 6.2e-53 210.7 113 85.0
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 6.2e-53 210.7 114 85.1
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 6.2e-53 210.7 116 83.6
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.0e-52 209.9 112 87.5
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 1.4e-52 209.5 116 82.8
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 1.8e-52 209.1 117 83.8
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 2.3e-52 208.8 114 82.5
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 4.0e-52 208.0 111 83.8
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 4.0e-52 208.0 118 83.1
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 5.2e-52 207.6 113 83.2
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.2e-52 207.6 115 80.9
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 6.8e-52 207.2 116 82.8
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 6.8e-52 207.2 111 86.5
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 8.9e-52 206.8 113 83.2
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 8.9e-52 206.8 118 83.1
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 1.2e-51 206.5 114 83.3
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 1.5e-51 206.1 116 81.9
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 1.5e-51 206.1 116 81.9
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 1.5e-51 206.1 116 81.9
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 1.5e-51 206.1 116 81.9
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 1.5e-51 206.1 115 79.1
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.5e-51 206.1 118 81.4
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 2.0e-51 205.7 116 81.0
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.9
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.9
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 2.6e-51 205.3 112 83.0
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 2.6e-51 205.3 113 84.1
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 2.6e-51 205.3 113 83.2
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 2.6e-51 205.3 115 80.9
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 81.9
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 81.9
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 3.4e-51 204.9 112 83.9
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 83.6
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 3.4e-51 204.9 115 80.0
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 4.4e-51 204.5 112 83.0
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 5.8e-51 204.1 116 81.0
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 5.8e-51 204.1 116 81.0
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 5.8e-51 204.1 116 81.0
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 5.8e-51 204.1 116 80.2
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 9.8e-51 203.4 115 81.7
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 1.3e-50 203.0 116 80.2
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 1.3e-50 203.0 115 77.4
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 1.7e-50 202.6 116 80.2
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 2.2e-50 202.2 113 80.5
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 2.9e-50 201.8 113 81.4
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 79.3
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 3.7e-50 201.4 116 80.2
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 3.7e-50 201.4 112 84.8
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 3.7e-50 201.4 116 80.2
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 4.9e-50 201.1 111 83.8
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 4.9e-50 201.1 116 80.2
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 4.9e-50 201.1 113 81.4
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 6.4e-50 200.7 113 80.5
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 1.1e-49 199.9 113 84.1
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 2.4e-49 198.7 115 80.0
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 3.2e-49 198.4 116 79.3
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 3.2e-49 198.4 116 80.2
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 4.1e-49 198.0 111 81.1
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 9.2e-49 196.8 112 80.4
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.2e-48 196.4 118 78.0
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 1.6e-48 196.1 116 77.6
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 3.5e-48 194.9 113 77.9
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 3.5e-48 194.9 112 77.7
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 4.6e-48 194.5 112 78.6
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 1.0e-47 193.4 113 77.0
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.3e-47 193.0 112 76.8
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.3e-47 193.0 112 76.8
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 3.9e-47 191.4 137 69.3
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.0e-47 191.0 104 83.7
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 6.6e-47 190.7 116 77.6
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 8.6e-47 190.3 108 81.5
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.1e-46 189.9 108 80.6
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 1.2e-45 186.4 151 62.3
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.1e-45 185.7 112 71.4
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 1.8e-44 182.6 180 55.6
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 3.1e-44 181.8 109 75.2
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 6.8e-44 180.6 104 80.8
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 8.9e-44 180.3 105 78.1
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 3.4e-43 178.3 111 72.1
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 3.4e-43 178.3 105 76.2
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 3.7e-42 174.9 113 66.4
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.7e-42 174.9 105 75.2
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.1e-41 173.3 104 73.1
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.4e-41 172.9 104 73.1
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 4.1e-41 171.4 103 73.8
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 4.1e-41 171.4 127 64.6
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 7.1e-41 170.6 96 81.2
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 7.1e-41 170.6 102 75.5
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 2.1e-40 169.1 101 74.3
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 7.8e-40 167.2 101 73.3
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 6.6e-39 164.1 115 68.7
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 1.6e-37 159.5 91 81.3
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 6.4e-34 147.5 115 63.5
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 3.2e-33 145.2 113 57.5
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 4.1e-33 144.8 111 58.6
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 9.2e-33 143.7 85 75.3
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 1.0e-31 140.2 116 60.3
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 5.1e-31 137.9 112 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 7.6e-27 124.0 109 51.4
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 1.3e-26 123.2 58 89.7
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 9.3e-25 117.1 114 49.1
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 4.6e-24 114.8 85 65.9
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 3.0e-23 112.1 57 78.9
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 1.9e-22 109.4 58 77.6
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 3.3e-22 108.6 60 76.7
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 5.6e-22 107.8 103 49.5
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 4.8e-21 104.8 99 50.5
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.4e-20 102.4 58 75.9
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 4.0e-20 101.7 83 63.9
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.3e-18 96.7 55 83.6
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 2.2e-18 95.9 149 40.9
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 2.9e-18 95.5 113 45.1
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 8.4e-18 94.0 58 82.8
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 1.9e-17 92.8 79 62.0
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 2.4e-17 92.4 96 46.9
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 1.6e-13 79.7 55 65.5
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 2.0e-11 72.8 46 67.4
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 1.6e-08 63.2 109 31.2
VMungo0540G1094 Vigna mungo HOM05D003030 ORTHO05D006417 7.9e-08 60.8 82 46.3


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