Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g07800 Fragaria vesca HOM05D000279 ORTHO05D022650 2.1e-152 542.3 276 100.0
FAN24G1790 Fragaria x ananassa HOM05D000279 ORTHO05D022650 4.7e-136 488.0 265 93.6
FAN24G1298 Fragaria x ananassa HOM05D000279 ORTHO05D022650 8.0e-120 434.1 229 95.6
MD05G1071300 Malus domestica HOM05D000279 ORTHO05D022650 4.3e-41 172.6 141 61.7
FAN20G2709 Fragaria x ananassa HOM05D000279 ORTHO05D022650 1.7e-40 170.6 187 54.0
FvH4_2g07801 Fragaria vesca HOM05D000279 ORTHO05D022650 9.4e-36 154.8 103 71.8
MD02G1268500 Malus domestica HOM05D000279 ORTHO05D000498 1.2e-17 94.7 190 34.2
MD07G1051800 Malus domestica HOM05D000279 ORTHO05D000498 4.4e-17 92.8 143 38.5
Prupe.2G052700 Prunus persica HOM05D000279 ORTHO05D000498 5.7e-17 92.4 178 33.1
Psat0s1122g0200 Pisum sativum HOM05D000279 ORTHO05D000498 7.5e-17 92.0 149 34.9
Prupe.2G052800 Prunus persica HOM05D000279 ORTHO05D000498 2.2e-16 90.5 175 33.1
FvH4_2g03601 Fragaria vesca HOM05D000366 ORTHO05D000498 2.8e-16 90.1 131 35.1
FAN24G2003 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.8e-16 90.1 131 35.1
MD02G1268400 Malus domestica HOM05D000279 ORTHO05D000498 4.8e-16 89.4 186 29.6
Medtr7g107200 Medicago truncatula HOM05D000279 ORTHO05D000498 4.8e-16 89.4 150 34.0
MD02G1267400 Malus domestica HOM05D000279 ORTHO05D000498 6.3e-16 89.0 173 34.7
RcHm_v2.0_Chr6g0252621 Rosa chinensis HOM05D000366 ORTHO05D000437 6.3e-16 89.0 124 37.1
Prupe.2G052500 Prunus persica HOM05D000279 ORTHO05D000498 8.3e-16 88.6 146 34.9
MD11G1209800 Malus domestica HOM05D000279 ORTHO05D000498 1.4e-15 87.8 104 41.3
Psat0s1122g0160 Pisum sativum HOM05D000279 ORTHO05D000498 1.8e-15 87.4 150 34.0
Prupe.2G054900 Prunus persica HOM05D000279 ORTHO05D000498 1.8e-15 87.4 144 36.8
TPR.G438 Trifolium pratense HOM05D000279 ORTHO05D000498 1.8e-15 87.4 119 37.0
Prupe.2G052900 Prunus persica HOM05D000279 ORTHO05D000498 3.1e-15 86.7 155 32.9
Lj5g0022331 Lotus japonicus HOM05D000279 ORTHO05D000498 5.3e-15 85.9 160 33.8
Lj6g0009337 Lotus japonicus HOM05D000279 ORTHO05D000498 5.3e-15 85.9 151 33.1
Psat3g026480 Pisum sativum HOM05D000279 ORTHO05D000498 5.3e-15 85.9 214 28.5
RcHm_v2.0_Chr5g0041511 Rosa chinensis HOM05D000279 ORTHO05D000498 5.3e-15 85.9 161 29.2
FAN03G1959 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.0e-15 85.5 134 38.1
MD07G1051300 Malus domestica HOM05D000279 ORTHO05D000498 7.0e-15 85.5 157 31.2
Psat1g190680 Pisum sativum HOM05D000279 ORTHO05D000498 7.0e-15 85.5 163 33.1
arahy.Tifrunner.gnm1.ann1.AZBE7T Arachis hypogaea HOM05D000279 ORTHO05D000498 9.1e-15 85.1 146 36.3
FvH4_7g04741 Fragaria vesca HOM05D000279 ORTHO05D000498 9.1e-15 85.1 134 38.1
FAN01G2354 Fragaria x ananassa HOM05D000279 ORTHO05D000498 9.1e-15 85.1 134 38.1
FAN06G2560 Fragaria x ananassa HOM05D000279 ORTHO05D000498 9.1e-15 85.1 134 38.1
FAN06G0166 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.2e-14 84.7 134 38.1
Prupe.2G052600 Prunus persica HOM05D000279 ORTHO05D000498 1.6e-14 84.3 157 34.4
Lj6g0007434 Lotus japonicus HOM05D000279 ORTHO05D000498 2.0e-14 84.0 118 37.3
Lj6g0016290 Lotus japonicus HOM05D000279 ORTHO05D000498 2.0e-14 84.0 115 39.1
Lalb_Chr02g0154011 Lupinus albus HOM05D000279 ORTHO05D000498 2.0e-14 84.0 125 36.0
Lj3g0027057 Lotus japonicus HOM05D000279 ORTHO05D000498 2.7e-14 83.6 106 36.8
MD02G1267800 Malus domestica HOM05D000279 ORTHO05D000498 2.7e-14 83.6 143 36.4
FAN10G2440 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.5e-14 83.2 134 37.3
MD07G1085500 Malus domestica HOM05D000279 ORTHO05D000498 3.5e-14 83.2 135 37.8
Medtr2g034780 Medicago truncatula HOM05D000279 ORTHO05D034589 3.5e-14 83.2 137 35.0
arahy.Tifrunner.gnm1.ann1.ETPV4R Arachis hypogaea HOM05D000279 ORTHO05D000498 4.5e-14 82.8 133 36.8
FvH4_7g04750 Fragaria vesca HOM05D000279 ORTHO05D000498 4.5e-14 82.8 133 36.8
FvH4_7g04760 Fragaria vesca HOM05D000279 ORTHO05D000498 4.5e-14 82.8 172 32.0
FAN06G1972 Fragaria x ananassa HOM05D000279 ORTHO05D000498 4.5e-14 82.8 172 32.0
Lj5g0005924 Lotus japonicus HOM05D000279 ORTHO05D000498 4.5e-14 82.8 113 40.7
FvH4_5g29370 Fragaria vesca HOM05D000660 ORTHO05D000498 5.9e-14 82.4 179 30.7
FAN18G1787 Fragaria x ananassa HOM05D000279 ORTHO05D000498 5.9e-14 82.4 179 29.6
Lj5g0001153 Lotus japonicus HOM05D000279 ORTHO05D000498 5.9e-14 82.4 153 34.6
arahy.Tifrunner.gnm1.ann1.8CWC6D Arachis hypogaea HOM05D000279 ORTHO05D000498 7.7e-14 82.0 189 28.6
arahy.Tifrunner.gnm1.ann1.TBP304 Arachis hypogaea HOM05D000279 ORTHO05D000498 7.7e-14 82.0 145 33.1
arahy.Tifrunner.gnm1.ann1.CJXR2J Arachis hypogaea HOM05D000279 ORTHO05D000498 1.0e-13 81.6 137 32.1
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 1.0e-13 81.6 155 35.5
Lalb_Chr02g0154001 Lupinus albus HOM05D000279 ORTHO05D000498 1.0e-13 81.6 120 35.8
MD07G1051500 Malus domestica HOM05D000279 ORTHO05D000498 1.0e-13 81.6 156 28.2
RcHm_v2.0_Chr1g0330011 Rosa chinensis HOM05D000279 ORTHO05D000498 1.0e-13 81.6 202 30.2
RcHm_v2.0_Chr1g0330121 Rosa chinensis HOM05D000279 ORTHO05D000498 1.0e-13 81.6 134 36.6
arahy.Tifrunner.gnm1.ann1.CQA1YI Arachis hypogaea HOM05D000279 ORTHO05D000498 1.3e-13 81.3 156 33.3
arahy.Tifrunner.gnm1.ann1.JJX8CS Arachis hypogaea HOM05D000279 ORTHO05D000498 1.3e-13 81.3 120 38.3
MD00G1065300 Malus domestica HOM05D000279 ORTHO05D000498 1.3e-13 81.3 130 35.4
VMungo0720G0446 Vigna mungo HOM05D000279 ORTHO05D000498 1.3e-13 81.3 152 34.2
Ca_09092_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 1.7e-13 80.9 132 34.1
Medtr8g011730 Medicago truncatula HOM05D000279 ORTHO05D000498 1.7e-13 80.9 197 30.5
TPR.G32309 Trifolium pratense HOM05D000279 ORTHO05D000498 1.7e-13 80.9 148 32.4
Ca_09094_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 2.2e-13 80.5 166 31.3
Lalb_Chr01g0017671 Lupinus albus HOM05D000279 ORTHO05D000498 2.2e-13 80.5 193 30.6
MD02G1268100 Malus domestica HOM05D000279 ORTHO05D000498 2.2e-13 80.5 98 40.8
RcHm_v2.0_Chr1g0330151 Rosa chinensis HOM05D000279 ORTHO05D000498 2.9e-13 80.1 102 40.2
RcHm_v2.0_Chr6g0252611 Rosa chinensis HOM05D000366 ORTHO05D000437 3.8e-13 79.7 169 30.8
RcHm_v2.0_Chr7g0228171 Rosa chinensis HOM05D000279 ORTHO05D000498 3.8e-13 79.7 158 32.3
VMungo0499G0001 Vigna mungo HOM05D000279 ORTHO05D000498 5.0e-13 79.3 158 31.0
arahy.Tifrunner.gnm1.ann1.BUD6J0 Arachis hypogaea HOM05D000279 ORTHO05D000498 6.5e-13 79.0 145 32.4
arahy.Tifrunner.gnm1.ann1.EVN2AK Arachis hypogaea HOM05D000279 ORTHO05D000498 6.5e-13 79.0 145 32.4
arahy.Tifrunner.gnm1.ann1.MD06FS Arachis hypogaea HOM05D000279 ORTHO05D000498 6.5e-13 79.0 159 34.0
MD07G1051100 Malus domestica HOM05D000279 ORTHO05D000498 6.5e-13 79.0 122 36.1
RcHm_v2.0_Chr5g0041491 Rosa chinensis HOM05D000279 ORTHO05D000498 6.5e-13 79.0 151 30.5
Lj5g0012225 Lotus japonicus HOM05D000279 ORTHO05D000498 8.5e-13 78.6 147 30.6
RcHm_v2.0_Chr1g0330181 Rosa chinensis HOM05D000279 ORTHO05D000498 8.5e-13 78.6 133 37.6
Lj5g0003132 Lotus japonicus HOM05D000279 ORTHO05D000498 1.1e-12 78.2 148 30.4
MD07G1085400 Malus domestica HOM05D000279 ORTHO05D000498 1.1e-12 78.2 179 32.4
RcHm_v2.0_Chr1g0330191 Rosa chinensis HOM05D000279 ORTHO05D000498 1.1e-12 78.2 101 40.6
Glyma.18G076700 Glycine max HOM05D000279 ORTHO05D000498 1.5e-12 77.8 107 40.2
Glyma.02G167600 Glycine max HOM05D000279 ORTHO05D000498 1.9e-12 77.4 114 36.0
MD00G1065000 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-12 77.4 205 31.2
MD02G1267700 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-12 77.4 200 29.5
MD07G1051000 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-12 77.4 205 31.2
Psat3g026640 Pisum sativum HOM05D000279 ORTHO05D000498 1.9e-12 77.4 135 32.6
RcHm_v2.0_Chr1g0330141 Rosa chinensis HOM05D000279 ORTHO05D000498 1.9e-12 77.4 102 39.2
Glyma.U031118 Glycine max HOM05D000279 ORTHO05D000498 3.2e-12 76.6 113 37.2
VMungo0720G2242 Vigna mungo HOM05D000279 ORTHO05D000498 3.2e-12 76.6 149 32.2
VMungo0720G2728 Vigna mungo HOM05D000279 ORTHO05D000498 3.2e-12 76.6 158 30.4
Glyma.10G088100 Glycine max HOM05D000279 ORTHO05D000498 4.2e-12 76.3 117 39.3
Phvul.007G264500 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 4.2e-12 76.3 114 35.1
arahy.Tifrunner.gnm1.ann1.HDRR2R Arachis hypogaea HOM05D000279 ORTHO05D000498 5.5e-12 75.9 151 31.8
arahy.Tifrunner.gnm1.ann1.NAS7CZ Arachis hypogaea HOM05D000279 ORTHO05D000498 7.2e-12 75.5 148 34.5
FvH4_7g04770 Fragaria vesca HOM05D000279 ORTHO05D000498 7.2e-12 75.5 147 29.9
FAN10G0926 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.2e-12 75.5 103 35.9
TPR.G29363 Trifolium pratense HOM05D000279 ORTHO05D000498 7.2e-12 75.5 110 35.5
Glyma.19G203900 Glycine max HOM05D000279 ORTHO05D000498 1.2e-11 74.7 105 39.0
MD07G1051700 Malus domestica HOM05D000279 ORTHO05D000498 1.2e-11 74.7 140 34.3
arahy.Tifrunner.gnm1.ann1.2PY7KW Arachis hypogaea HOM05D000279 ORTHO05D000498 1.6e-11 74.3 147 34.0
arahy.Tifrunner.gnm1.ann1.B3AK4H Arachis hypogaea HOM05D000279 ORTHO05D000498 1.6e-11 74.3 151 31.8
Glyma.08G329800 Glycine max HOM05D000279 ORTHO05D000498 2.1e-11 73.9 169 29.0
arahy.Tifrunner.gnm1.ann1.3933Z3 Arachis hypogaea HOM05D000279 ORTHO05D000498 2.7e-11 73.6 102 42.2
RcHm_v2.0_Chr1g0330201 Rosa chinensis HOM05D000279 ORTHO05D000498 2.7e-11 73.6 147 27.9
FAN06G0100 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-11 73.2 97 36.1
FAN06G1761 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.6e-11 73.2 97 36.1
Phvul.007G264600 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 3.6e-11 73.2 152 31.6
VMungo0582G0001 Vigna mungo HOM05D000279 ORTHO05D000498 3.6e-11 73.2 160 26.2
Psat3g025560 Pisum sativum HOM05D000279 ORTHO05D000498 4.7e-11 72.8 149 32.2
Lalb_Chr25g0287751 Lupinus albus HOM05D000279 ORTHO05D000498 6.1e-11 72.4 154 31.8
TPR.G32291 Trifolium pratense HOM05D000279 ORTHO05D000498 6.1e-11 72.4 149 31.5
VMungo1383G2970 Vigna mungo HOM05D000279 ORTHO05D000498 6.1e-11 72.4 149 32.2
FvH4_5g32130 Fragaria vesca HOM05D000279 ORTHO05D000498 8.0e-11 72.0 144 31.2
Glyma.03G206100 Glycine max HOM05D000279 ORTHO05D000498 8.0e-11 72.0 105 38.1
Lalb_Chr25g0287771 Lupinus albus HOM05D000279 ORTHO05D000498 8.0e-11 72.0 167 28.1
Phvul.001G199800 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 8.0e-11 72.0 149 32.2
arahy.Tifrunner.gnm1.ann1.JILP9H Arachis hypogaea HOM05D000279 ORTHO05D000498 1.0e-10 71.6 124 34.7
arahy.Tifrunner.gnm1.ann1.PEMB6S Arachis hypogaea HOM05D000092 ORTHO05D000042 1.4e-10 71.2 130 37.7
FAN18G0246 Fragaria x ananassa HOM05D000279 ORTHO05D000498 1.4e-10 71.2 144 31.9
arahy.Tifrunner.gnm1.ann1.EI0XMN Arachis hypogaea HOM05D000092 ORTHO05D000042 1.8e-10 70.9 130 37.7
MD03G1193600 Malus domestica HOM05D000279 ORTHO05D000498 4.0e-10 69.7 211 25.6
Phvul.010G098000 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 4.0e-10 69.7 134 31.3
arahy.Tifrunner.gnm1.ann1.4VV3LB Arachis hypogaea HOM05D000279 ORTHO05D000498 5.2e-10 69.3 97 41.2
Lj6g0011930 Lotus japonicus HOM05D000279 ORTHO05D000498 5.2e-10 69.3 167 28.7
Lalb_Chr25g0287761 Lupinus albus HOM05D000279 ORTHO05D000498 5.2e-10 69.3 162 28.4
FAN23G2153 Fragaria x ananassa HOM05D000279 ORTHO05D000498 6.8e-10 68.9 147 29.3
Glyma.19G203800 Glycine max HOM05D000279 ORTHO05D000498 1.2e-09 68.2 149 32.9
VMungo0331G0088 Vigna mungo HOM05D000006 ORTHO05D000001 3.4e-09 66.6 100 35.0
Phvul.010G097900 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 5.7e-09 65.9 112 33.0
arahy.Tifrunner.gnm1.ann1.K7B5IG Arachis hypogaea HOM05D000279 ORTHO05D000498 7.5e-09 65.5 149 28.2
arahy.Tifrunner.gnm1.ann1.QMFS2J Arachis hypogaea HOM05D000279 ORTHO05D000498 7.5e-09 65.5 105 36.2
arahy.Tifrunner.gnm1.ann1.ZE2H4F Arachis hypogaea HOM05D000279 ORTHO05D000498 1.3e-08 64.7 104 36.5
arahy.Tifrunner.gnm1.ann1.91HE16 Arachis hypogaea HOM05D000279 ORTHO05D000498 3.7e-08 63.2 103 36.9
arahy.Tifrunner.gnm1.ann1.P65MK0 Arachis hypogaea HOM05D000279 ORTHO05D000498 3.7e-08 63.2 117 36.8
arahy.Tifrunner.gnm1.ann1.B5UF84 Arachis hypogaea HOM05D000279 ORTHO05D000498 6.3e-08 62.4 103 36.9
Phvul.010G097800 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 6.3e-08 62.4 136 29.4
arahy.Tifrunner.gnm1.ann1.ZQ6DNV Arachis hypogaea HOM05D000279 ORTHO05D000498 1.1e-07 61.6 102 34.3
TPR.G30776 Trifolium pratense HOM05D000279 ORTHO05D000498 1.1e-07 61.6 148 30.4
Medtr7g107160 Medicago truncatula HOM05D000279 ORTHO05D000498 1.8e-07 60.8 126 31.7
TPR.G6306 Trifolium pratense HOM05D000279 ORTHO05D000498 2.4e-07 60.5 191 27.2
arahy.Tifrunner.gnm1.ann1.8ZY77E Arachis hypogaea HOM05D000279 ORTHO05D000498 3.1e-07 60.1 131 29.8
Glyma.19G203700 Glycine max HOM05D000279 ORTHO05D000498 3.1e-07 60.1 106 33.0
Lj5g0008542 Lotus japonicus HOM05D000279 ORTHO05D000498 5.4e-07 59.3 160 30.6
arahy.Tifrunner.gnm1.ann1.1X0C2C Arachis hypogaea HOM05D000092 ORTHO05D000042 7.0e-07 58.9 114 35.1
arahy.Tifrunner.gnm1.ann1.QHYE08 Arachis hypogaea HOM05D000279 ORTHO05D000498 7.0e-07 58.9 161 28.0
Ca_09093_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 7.0e-07 58.9 144 31.9
Lj6g0021728 Lotus japonicus HOM05D000092 ORTHO05D000042 7.0e-07 58.9 199 28.6
arahy.Tifrunner.gnm1.ann1.ER1HM3 Arachis hypogaea HOM05D000279 ORTHO05D000498 1.2e-06 58.2 150 28.0
Psat3g026320 Pisum sativum HOM05D000279 ORTHO05D000498 1.2e-06 58.2 152 28.9
TPR.G9118 Trifolium pratense HOM05D000279 ORTHO05D000498 1.2e-06 58.2 130 30.0
Medtr7g107170 Medicago truncatula HOM05D000279 ORTHO05D000498 2.0e-06 57.4 186 26.9
TPR.G14396 Trifolium pratense HOM05D000279 ORTHO05D000498 2.0e-06 57.4 191 26.7
TPR.G40804 Trifolium pratense HOM05D000279 ORTHO05D000498 2.0e-06 57.4 98 29.6
TPR.G9127 Trifolium pratense HOM05D000279 ORTHO05D000498 2.0e-06 57.4 96 31.2
arahy.Tifrunner.gnm1.ann1.K2WW2S Arachis hypogaea HOM05D000279 ORTHO05D000498 2.7e-06 57.0 102 31.4
arahy.Tifrunner.gnm1.ann1.E8HPD1 Arachis hypogaea HOM05D000279 ORTHO05D000498 3.5e-06 56.6 102 32.4
Lj6g0012522 Lotus japonicus HOM05D000005 ORTHO05D000012 4.5e-06 56.2 85 36.5
Psat0s1123g0040 Pisum sativum HOM05D000279 ORTHO05D000498 7.7e-06 55.5 136 27.9


User provided reference genes

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