Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g07541 Fragaria vesca HOM05D011771 ORTHO05D025391 1.7e-249 865.5 436 100.0
FvH4_1g02410 Fragaria vesca HOM05D005706 ORTHO05D025391 3.4e-40 170.2 247 46.2
RcHm_v2.0_Chr5g0081051 Rosa chinensis HOM05D005706 ORTHO05D016446 2.7e-21 107.5 396 28.0
FvH4_3g30141 Fragaria vesca HOM05D002675 ORTHO05D022630 3.3e-19 100.5 120 52.5
FAN17G2637 Fragaria x ananassa HOM05D005706 ORTHO05D007474 1.9e-14 84.7 71 60.6
FvH4_4g30080 Fragaria vesca HOM05D005706 ORTHO05D007474 3.2e-14 84.0 71 60.6
FAN07G0248 Fragaria x ananassa HOM05D005706 ORTHO05D007474 3.2e-14 84.0 71 60.6
FAN12G1642 Fragaria x ananassa HOM05D005706 ORTHO05D007474 3.2e-14 84.0 71 60.6
RcHm_v2.0_Chr4g0438351 Rosa chinensis HOM05D005706 ORTHO05D007474 4.2e-14 83.6 72 59.7
FAN18G4574 Fragaria x ananassa HOM05D005706 ORTHO05D025391 1.2e-13 82.0 43 90.7
FvH4_1g23806 Fragaria vesca HOM05D011771 ORTHO05D014214 2.7e-13 80.9 115 48.7
RcHm_v2.0_Chr7g0217401 Rosa chinensis HOM05D005101 ORTHO05D001271 4.6e-13 80.1 159 35.2
FvH4_5g23170 Fragaria vesca HOM05D010612 ORTHO05D025391 6.7e-12 76.3 58 67.2
FvH4_3g37290 Fragaria vesca HOM05D000062 ORTHO05D035406 3.7e-10 70.5 88 46.6
FvH4_4g08541 Fragaria vesca HOM05D011771 ORTHO05D014214 3.7e-10 70.5 57 68.4
FvH4_6g39361 Fragaria vesca HOM05D011771 ORTHO05D014214 4.8e-10 70.1 57 68.4
FvH4_6g29620 Fragaria vesca HOM05D000062 ORTHO05D035406 1.4e-09 68.6 96 45.8
CANSAT64G1878 Cannabis sativa HOM05D005706 ORTHO05D007474 2.4e-09 67.8 73 49.3
MD16G1061200 Malus domestica HOM05D005706 ORTHO05D007474 3.1e-09 67.4 72 51.4
FvH4_2g20031 Fragaria vesca HOM05D011771 ORTHO05D014214 1.2e-08 65.5 79 51.9
FvH4_1g15102 Fragaria vesca HOM05D011771 ORTHO05D014214 1.5e-08 65.1 210 30.5
FAN04G2429 Fragaria x ananassa HOM05D005706 ORTHO05D025391 1.5e-08 65.1 30 96.7
Prupe.1G286800 Prunus persica HOM05D005706 ORTHO05D007474 1.5e-08 65.1 72 50.0
THA.LOC104808534 Tarenaya hassleriana HOM05D005706 ORTHO05D007474 2.6e-08 64.3 105 40.0
Medtr5g045620 Medicago truncatula HOM05D005706 ORTHO05D007474 4.5e-08 63.5 109 34.9
Medtr5g044930 Medicago truncatula HOM05D005706 ORTHO05D007474 5.9e-08 63.2 109 34.9
RcHm_v2.0_Chr3g0479601 Rosa chinensis HOM05D011771 ORTHO05D012013 5.9e-08 63.2 56 53.6
RcHm_v2.0_Chr5g0075961 Rosa chinensis HOM05D001888 ORTHO05D001842 5.9e-08 63.2 108 34.3
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 7.7e-08 62.8 231 30.3
FvH4_5g26490 Fragaria vesca HOM05D005101 ORTHO05D001271 1.3e-07 62.0 81 48.1
FAN13G2092 Fragaria x ananassa HOM05D005101 ORTHO05D001271 1.3e-07 62.0 81 48.1
FAN18G2527 Fragaria x ananassa HOM05D005101 ORTHO05D001271 1.3e-07 62.0 81 48.1
arahy.Tifrunner.gnm1.ann1.C9N2WV Arachis hypogaea HOM05D005706 ORTHO05D007474 1.7e-07 61.6 78 42.3
FAN04G0351 Fragaria x ananassa HOM05D005101 ORTHO05D001271 1.7e-07 61.6 81 48.1
ECA233G5550 Erigeron canadensis HOM05D005706 ORTHO05D007474 3.8e-07 60.5 72 40.3
Cfa008881 Carpinus fangiana HOM05D005706 ORTHO05D007474 5.0e-07 60.1 67 47.8
FAN08G1478 Fragaria x ananassa HOM05D005101 ORTHO05D001271 5.0e-07 60.1 79 49.4
arahy.Tifrunner.gnm1.ann1.ULTQ00 Arachis hypogaea HOM05D005706 ORTHO05D007474 6.5e-07 59.7 78 41.0
RcHm_v2.0_Chr4g0417791 Rosa chinensis HOM05D002024 ORTHO05D016446 8.5e-07 59.3 59 54.2
TPR.G23743 Trifolium pratense HOM05D005706 ORTHO05D007474 8.5e-07 59.3 73 45.2
Haze_11910 Corylus avellana HOM05D005706 ORTHO05D007474 1.1e-06 58.9 67 47.8
DCAR_007196 Daucus carota HOM05D005706 ORTHO05D007474 1.1e-06 58.9 72 47.2
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 1.1e-06 58.9 231 29.4
Gohir.D13G082200 Gossypium hirsutum HOM05D005706 ORTHO05D007474 1.4e-06 58.5 72 45.8
Gorai.013G094000 Gossypium raimondii HOM05D005706 ORTHO05D007474 1.4e-06 58.5 72 45.8
TAR622G0768 Trochodendron aralioides HOM05D005706 ORTHO05D007474 2.5e-06 57.8 72 47.2
HanXRQChr08g0211761 Helianthus annuus HOM05D005706 ORTHO05D007474 3.2e-06 57.4 72 41.7
Nitab4.5_0002341g0050 Nicotiana tabacum HOM05D005706 ORTHO05D007474 3.2e-06 57.4 62 50.0
Solyc01g088750.3 Solanum lycopersicum HOM05D005706 ORTHO05D007474 3.2e-06 57.4 63 49.2
CSS0014081 Camellia sinensis var. sinensis HOM05D005706 ORTHO05D007474 4.2e-06 57.0 73 45.2
Gohir.A13G082600 Gossypium hirsutum HOM05D005706 ORTHO05D007474 4.2e-06 57.0 72 44.4
Atru.chr11.1629 Acer truncatum HOM05D005706 ORTHO05D007474 5.5e-06 56.6 67 43.3
CiPaw.05G125300 Carya illinoinensis HOM05D005706 ORTHO05D007474 7.2e-06 56.2 81 40.7
QL12p030791 Quercus lobata HOM05D005706 ORTHO05D007474 7.2e-06 56.2 72 44.4
Lj2g0007336 Lotus japonicus HOM05D005706 ORTHO05D007474 9.4e-06 55.8 73 43.8
Nitab4.5_0000563g0130 Nicotiana tabacum HOM05D005706 ORTHO05D007474 9.4e-06 55.8 55 50.9


User provided reference genes

Program Settings