Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 8.9e-104 380.2 179 100.0
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.3e-78 296.6 266 61.7
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 4.9e-78 294.7 258 62.8
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 2.0e-71 272.7 260 57.7
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 7.4e-58 227.6 231 55.0
FAN24G1908 Fragaria x ananassa HOM05D007054 ORTHO05D008888 5.5e-53 211.5 205 57.1
FAN24G0450 Fragaria x ananassa HOM05D007054 ORTHO05D008888 6.1e-52 208.0 106 93.4
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 6.1e-52 208.0 260 46.5
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 1.3e-46 190.3 261 42.5
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 5.7e-42 174.9 258 40.3
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 3.2e-37 159.1 260 38.5
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 6.7e-35 151.4 236 37.7
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.0e-34 149.8 261 37.2
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 2.6e-34 149.4 239 37.7
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 3.7e-33 145.6 257 35.8
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 6.3e-33 144.8 231 38.5
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 1.4e-32 143.7 258 36.4
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 9.1e-32 141.0 255 35.7
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 9.1e-32 141.0 260 35.8
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 1.5e-31 140.2 255 33.7
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.3e-30 137.1 242 34.3
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 3.8e-30 135.6 237 34.6
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 5.0e-30 135.2 234 35.5
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.0e-30 135.2 237 34.6
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 1.9e-29 133.3 260 33.5
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 4.2e-29 132.1 221 38.0
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 4.2e-29 132.1 237 34.2
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 2.7e-28 129.4 231 34.2
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 3.6e-28 129.0 246 35.4
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 1.8e-27 126.7 205 36.1
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 1.8e-27 126.7 236 34.3
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 5.2e-27 125.2 231 34.2
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 8.8e-27 124.4 214 33.6
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 8.8e-27 124.4 184 37.0
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 1.5e-26 123.6 230 36.1
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 2.0e-26 123.2 210 34.3
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 2.6e-26 122.9 232 35.3
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 4.4e-26 122.1 202 35.6
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 1.7e-25 120.2 228 36.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 3.7e-25 119.0 180 33.3
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 3.7e-25 119.0 217 33.2
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 4.8e-25 118.6 239 33.1
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 6.3e-25 118.2 195 35.4
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.1e-24 117.5 221 33.5
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 4.1e-24 115.5 233 33.9
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 7.7e-23 111.3 193 32.6
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 7.7e-23 111.3 188 33.5
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 1.0e-22 110.9 176 34.1
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 1.0e-22 110.9 229 29.3
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.3e-22 110.5 185 36.8
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.7e-22 110.2 233 29.6
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 2.2e-22 109.8 174 35.1
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 2.2e-22 109.8 233 29.6
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 2.9e-22 109.4 191 34.6
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 6.5e-22 108.2 78 59.0
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 6.5e-22 108.2 78 59.0
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 1.9e-21 106.7 245 30.6
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 2.5e-21 106.3 78 59.0
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 3.2e-21 105.9 206 31.6
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 1.6e-20 103.6 68 67.6
MSTRG.5374 Avicennia marina HOM05D007054 ORTHO05D008888 1.6e-20 103.6 214 28.5
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 1.6e-20 103.6 174 33.9
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 3.6e-20 102.4 71 60.6
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 6.1e-20 101.7 64 64.1
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 2.0e-18 96.7 224 27.2
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 4.4e-18 95.5 59 64.4
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.3e-17 94.0 200 28.0
Nitab4.5_0002263g0050 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.7e-17 93.6 146 35.6
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 2.2e-17 93.2 62 61.3
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 4.8e-17 92.0 68 52.9
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 4.8e-17 92.0 68 52.9
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.1e-16 90.9 168 31.5
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 3.1e-16 89.4 69 53.6
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 4.1e-16 89.0 69 53.6
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 4.1e-16 89.0 68 51.5
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 5.4e-16 88.6 63 58.7
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 9.1e-16 87.8 170 28.2
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 9.1e-16 87.8 68 51.5
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 9.1e-16 87.8 68 51.5
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 9.1e-16 87.8 178 28.1
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 9.1e-16 87.8 178 28.1
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 4.5e-15 85.5 59 55.9
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 4.5e-15 85.5 157 30.6
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 4.5e-15 85.5 69 50.7
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 5.9e-15 85.1 69 52.2
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 7.7e-15 84.7 69 50.7
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.8e-14 82.4 59 54.2
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 3.8e-14 82.4 58 55.2
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 1.1e-13 80.9 58 51.7
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 1.5e-13 80.5 61 50.8
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 1.5e-13 80.5 58 53.4
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 2.5e-13 79.7 63 55.6
Aa31LG1G22300 Aethionema arabicum HOM05D007054 ORTHO05D008888 5.5e-13 78.6 59 50.8
Aa31sc103G20 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.2e-12 77.4 59 49.2
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 8.0e-12 74.7 50 62.0
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.0e-11 72.8 70 42.9
Sed0021769 Sechium edule HOM05D007054 ORTHO05D008888 5.2e-11 72.0 58 50.0
VMungo1215G1743 Vigna mungo HOM05D007054 ORTHO05D008888 1.5e-10 70.5 77 46.8
CANSAT25G1642 Cannabis sativa HOM05D007054 ORTHO05D008888 2.0e-10 70.1 93 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 1.3e-09 67.4 64 48.4
HPP92_001831 Vanilla planifolia HOM05D007054 ORTHO05D008888 2.2e-09 66.6 46 58.7
Cpa.g.sc62.54 Carica papaya HOM05D007054 ORTHO05D008888 2.4e-08 63.2 48 56.2
Actinidia17847 Actinidia chinensis HOM05D000827 ORTHO05D008888 4.5e-07 58.9 96 38.5
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 1.7e-06 57.0 48 45.8


User provided reference genes

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