Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 2.0e-161 572.4 289 100.0
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.0e-157 557.8 287 98.3
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 9.5e-156 553.5 282 99.6
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 6.8e-146 520.8 277 95.3
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 6.4e-144 514.2 277 93.9
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.7e-136 489.6 287 88.9
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 6.2e-131 471.1 276 86.2
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 5.8e-129 464.5 276 85.1
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 5.4e-127 458.0 276 83.0
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 7.1e-127 457.6 277 84.8
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 2.1e-126 456.1 271 87.1
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 1.7e-125 453.0 271 84.5
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 3.3e-124 448.7 277 81.9
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 9.6e-124 447.2 277 81.6
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.8e-123 445.7 269 82.5
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 4.7e-123 444.9 277 82.3
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 1.1e-122 443.7 277 80.9
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 1.4e-122 443.4 252 89.7
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 1.4e-122 443.4 272 82.4
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 1.4e-122 443.4 269 82.5
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 2.4e-122 442.6 271 84.1
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 2.4e-122 442.6 277 81.9
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 1.2e-121 440.3 274 81.0
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 1.5e-121 439.9 277 82.7
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 2.6e-121 439.1 279 80.6
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 1.7e-120 436.4 277 80.1
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 3.8e-120 435.3 277 79.8
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 3.8e-120 435.3 277 80.1
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 6.4e-120 434.5 281 78.3
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 6.4e-120 434.5 277 80.9
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 8.4e-120 434.1 281 78.3
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 1.4e-119 433.3 273 80.6
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 2.4e-119 432.6 274 79.9
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 3.2e-119 432.2 277 79.8
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 5.4e-119 431.4 272 80.5
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 7.1e-119 431.0 278 80.6
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 9.3e-119 430.6 277 80.9
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 1.2e-118 430.3 272 80.1
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 6.0e-118 427.9 276 79.3
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 3.9e-117 425.2 272 79.4
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 5.1e-117 424.9 273 79.9
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 1.1e-116 423.7 273 76.9
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 1.9e-116 422.9 277 78.7
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 4.3e-116 421.8 274 78.1
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 2.1e-115 419.5 309 71.2
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 3.6e-115 418.7 274 75.9
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 1.1e-114 417.2 277 79.1
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 1.8e-114 416.4 278 74.5
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 1.8e-114 416.4 271 76.0
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 4.0e-114 415.2 278 77.0
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 5.3e-114 414.8 277 77.6
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 2.0e-113 412.9 275 76.4
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 2.0e-113 412.9 274 76.6
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 7.6e-113 411.0 268 76.9
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 7.6e-113 411.0 268 76.9
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 1.7e-112 409.8 276 73.6
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 1.7e-112 409.8 277 75.1
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 8.4e-112 407.5 277 76.2
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 1.1e-111 407.1 277 75.1
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 4.2e-111 405.2 274 74.8
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 5.4e-111 404.8 277 75.5
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 3.5e-110 402.1 288 71.5
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 2.3e-109 399.4 289 70.9
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 5.1e-109 398.3 281 70.8
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 9.6e-108 394.0 281 71.5
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.3e-107 393.7 284 71.5
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.3e-107 393.7 274 70.8
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 2.1e-107 392.9 288 68.4
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 2.1e-107 392.9 288 68.4
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 2.1e-107 392.9 288 68.8
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 2.8e-107 392.5 288 68.4
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 2.8e-107 392.5 288 68.4
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 2.8e-107 392.5 288 68.4
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 2.8e-107 392.5 273 74.7
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 4.8e-107 391.7 288 69.1
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 1.4e-106 390.2 287 69.3
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 2.4e-106 389.4 288 68.8
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 5.3e-106 388.3 279 71.7
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 6.9e-106 387.9 274 68.2
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 9.0e-106 387.5 251 78.5
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 5.8e-105 384.8 276 69.9
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 1.3e-104 383.6 287 72.1
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 1.1e-103 380.6 272 71.3
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 7.1e-103 377.9 272 71.0
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 2.3e-101 372.9 252 74.6
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 5.1e-101 371.7 280 69.3
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 8.7e-101 370.9 275 68.4
Actinidia12956 Actinidia chinensis HOM05D005412 ORTHO05D006096 2.5e-100 369.4 254 76.0
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 2.6e-97 359.4 264 68.6
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 1.1e-95 354.0 385 52.2
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 2.1e-94 349.7 245 75.1
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 3.0e-93 345.9 274 66.4
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 1.5e-92 343.6 251 70.5
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 2.5e-92 342.8 271 60.1
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 6.9e-90 334.7 271 59.8
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 1.2e-89 334.0 271 58.7
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 5.0e-88 328.6 274 65.0
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 1.2e-86 323.9 251 62.5
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 4.6e-86 322.0 264 70.1
TPR.G30995 Trifolium pratense HOM05D005412 ORTHO05D006096 7.4e-84 314.7 198 79.8
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 5.9e-81 305.1 189 77.2
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.7e-80 303.5 186 78.5
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 2.0e-76 290.0 187 72.2
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 7.4e-76 288.1 264 56.1
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 2.0e-73 280.0 265 53.2
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 1.3e-64 250.8 261 51.0
SMO196G0062 Selaginella moellendorffii HOM05D005412 ORTHO05D006096 1.6e-62 243.8 268 50.4
SHI05371 Sapria himalayana HOM05D005412 ORTHO05D006096 1.3e-35 154.5 178 55.6
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 4.9e-35 152.5 248 37.1
Hma1.2p1_0028F.1_g017490 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 1.6e-33 147.5 83 79.5
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 1.1e-31 141.4 119 52.9
Rhsim11G0175200 Rhododendron simsii HOM05D063897 ORTHO05D006096 8.1e-22 108.6 108 56.5
TPR.G30833 Trifolium pratense HOM05D005412 ORTHO05D006096 2.9e-19 100.1 68 83.8
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 4.1e-18 96.3 112 42.0
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 2.0e-12 77.4 66 65.2
Hma1.2p1_0027F.1_g017200 Hydrangea macrophylla HOM05D005412 ORTHO05D006096 2.0e-12 77.4 55 67.3
PRCOL_00003309 Prasinoderma coloniale HOM05D005412 ORTHO05D006096 5.8e-12 75.9 117 32.5
SHI05372 Sapria himalayana HOM05D005412 ORTHO05D006096 4.6e-09 66.2 46 69.6
CBR_g37896 Chara braunii HOM05D012618 ORTHO05D000497 7.3e-07 58.9 40 62.5


User provided reference genes

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