Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g05171 Fragaria vesca HOM05D004520 ORTHO05D000031 6.6e-50 200.7 122 100.0
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 1.3e-45 186.4 121 79.3
FvH4_4g16143 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-45 184.1 123 88.6
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 2.1e-27 125.9 121 57.0
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 6.0e-19 97.8 84 53.6
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 6.6e-18 94.4 86 52.3
RcHm_v2.0_Chr4g0396801 Rosa chinensis HOM05D000030 ORTHO05D000031 3.6e-16 88.6 85 54.1
RcHm_v2.0_Chr3g0496341 Rosa chinensis HOM05D000030 ORTHO05D000031 1.1e-15 87.0 83 53.0
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 1.1e-15 87.0 83 53.0
FvH4_4g06882 Fragaria vesca HOM05D000030 ORTHO05D000031 9.0e-15 84.0 71 53.5
RcHm_v2.0_Chr7g0235371 Rosa chinensis HOM05D000030 ORTHO05D000009 5.8e-14 81.3 70 50.0
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 6.4e-13 77.8 81 45.7
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 1.9e-12 76.3 83 49.4
RcHm_v2.0_Chr2g0142391 Rosa chinensis HOM05D000030 ORTHO05D000031 5.4e-12 74.7 83 45.8
MD05G1210500 Malus domestica HOM05D000030 ORTHO05D000031 3.5e-11 72.0 71 43.7
FAN15G0861 Fragaria x ananassa HOM05D000457 ORTHO05D000031 3.0e-10 68.9 83 42.2
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 5.1e-10 68.2 83 41.0
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 8.7e-10 67.4 76 43.4
Lj2C454T1 Lonicera japonica HOM05D008722 ORTHO05D000031 1.5e-09 66.6 70 45.7
FvH4_1g21452 Fragaria vesca HOM05D000030 ORTHO05D000031 2.5e-09 65.9 76 42.1
RcHm_v2.0_Chr1g0351191 Rosa chinensis HOM05D000030 ORTHO05D000031 7.4e-09 64.3 67 49.3
FvH4_1g29751 Fragaria vesca HOM05D044676 ORTHO05D000031 1.6e-08 63.2 73 39.7
Atru.chr7.1300 Acer truncatum HOM05D000030 ORTHO05D000009 4.0e-07 58.5 86 36.0
Atru.chr11.1061 Acer truncatum HOM05D000044 ORTHO05D000009 9.0e-07 57.4 86 34.9
Atru.chr4.1709 Acer truncatum HOM05D000030 ORTHO05D000009 9.0e-07 57.4 86 34.9
Atru.chr3.4252 Acer truncatum HOM05D000030 ORTHO05D000031 1.5e-06 56.6 86 34.9
Atru.chr1.2973 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-06 56.2 73 41.1
Aqoxy7G02386 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 2.6e-06 55.8 86 36.0
Atru.chr7.19 Acer truncatum HOM05D000030 ORTHO05D000031 3.4e-06 55.5 86 33.7
Atru.ctg1438.3 Acer truncatum HOM05D000030 ORTHO05D000009 3.4e-06 55.5 86 33.7
Atru.chr7.12 Acer truncatum HOM05D000030 ORTHO05D000009 5.8e-06 54.7 86 33.7
FvH4_3g19351 Fragaria vesca HOM05D000030 ORTHO05D000031 5.8e-06 54.7 65 41.5
Hund23106 Selenicereus undatus HOM05D000030 ORTHO05D000031 5.8e-06 54.7 87 36.8
RcHm_v2.0_Chr6g0289081 Rosa chinensis HOM05D000030 ORTHO05D000031 7.6e-06 54.3 35 62.9


User provided reference genes

Program Settings